G1158371


Basic Information

Item Value
gene id G1158371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 27814382 ~ 27814985 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1321074
tgttaatcagttctccagtcttctcttcttcgtcctcctccaatgtgacagtaatctccccctcttcatcctccaCTCCCAAAACggcgtcttcctcctcttctttcactctgAAGGCGtcattctcttcctcctcttcttttactgtaacatcctcctcctctttcactctgaacgagtCTTCCTCTTCTTTGACTGTAACGGCTTTCacttcttctttcactgtaacagcctcaccctctacttgtttttgtattgtaacatccttctcttcctcctcctccttgacGAGAGCTTccttctccgtccagcagacatcctcttctttaacaggaggagagtagcttagtgaagTCATGGTCGGGGATAATAGCTtgttagcattagcgactagactagtgctaacttaaccagccagctagctagacTTATAACGTAAATATTAAATTAAATGAGGTAGCTAGTTGTTTACACATACGTATGTTTAAAGCATAGTGGCAAATAAACCACGAAATTGTCTAAAGAACTTGAATGTTCCGACTTTGTTGGCTAGCGAGCAACCGAG

Function

NR:

description
zinc finger protein 271-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1321074 True 565 lncRNA 0.43 2 27814382 27814985

Neighbor

gene id symbol gene type direction distance location
LOC110485129 LOC106591690 coding upstream 25809 27768154 ~ 27788573 (+)
LOC118938453 NA coding upstream 89965 27722180 ~ 27724417 (+)
LOC118938440 NA coding upstream 183612 27258575 ~ 27630770 (+)
LOC118938450 LOC106604339 coding upstream 269689 27539872 ~ 27545029 (+)
LOC110487369 LOC106595056 coding upstream 315961 27493088 ~ 27498421 (+)
LOC118938246 LOC106595566 coding downstream 49855 27863508 ~ 27865760 (+)
LOC110487376 NA coding downstream 92800 27907785 ~ 27915756 (+)
LOC110485128 LOC106595049 coding downstream 100266 27915251 ~ 27943776 (+)
LOC118938251 NA coding downstream 129471 27944456 ~ 27950411 (+)
LOC110487397 LOC106590567 coding downstream 209992 28024977 ~ 28035081 (+)
G1158351 NA non-coding upstream 3348 27810093 ~ 27811034 (+)
G1158343 NA non-coding upstream 12609 27800660 ~ 27801773 (+)
G1159437 NA non-coding upstream 27716 27781056 ~ 27786666 (+)
G1159434 NA non-coding upstream 30238 27778508 ~ 27784144 (+)
G1158355 NA non-coding upstream 207071 27606348 ~ 27607311 (+)
G1159469 NA non-coding downstream 31139 27846124 ~ 27919990 (+)
G1158375 NA non-coding downstream 36649 27851634 ~ 27852794 (+)
G1159550 NA non-coding downstream 210070 28025055 ~ 28077035 (+)
G1159548 NA non-coding downstream 231042 28046027 ~ 28057271 (+)
G1159667 NA non-coding downstream 383250 28198235 ~ 28198615 (+)
G1159435 NA other upstream 28217 27780222 ~ 27786165 (+)
G1158342 NA other upstream 45741 27493154 ~ 27768641 (+)
LOC110485126 NA other upstream 523164 27285432 ~ 27291404 (+)
LOC110487383 LOC106564416 other upstream 644588 26977083 ~ 27174368 (+)
G1159631 NA other downstream 304680 28119665 ~ 28125638 (+)
G1159684 NA other downstream 437545 28252530 ~ 28257974 (+)
LOC110513252 NA other downstream 524000 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 other downstream 657691 28472333 ~ 28500669 (+)

Expression


Co-expression Network