G1159548


Basic Information

Item Value
gene id G1159548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28046027 ~ 28057271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1322354
AGAGCTCTTGAGAATATACGTCACTCACTATTTTTGGCTGGTCTCCGTCTGTTTCATTTCCCCTAGAACCTTACAAACGCTGGAAACTCctccctgctaatgaggaaaccaatAGTTATGGATGTACTATATCTGCCTGGAGCAAAAATGccctttttggagtactgcccatgggtacccccctatcaagaatccagtcggacactgttgcttatacaactcttttagctagacggctaatactacagaactggaagatggcagctcccccatcttataaatattgggtgagagatgtgttgtgctctctgaaactagaaaaaattcaattcaattcacgtgggaaccccaaactgtttaatgaggcttgggctccattccggtcttactttaaacagtccatcctctgatggcattccaattaaaactaaaataagtctgtatttgacccccctgtgacttaagggttggaggagcttgaagtgtgagcttgtttttcccagttatttttacattttgttcacacctacatgaataatcattctatttattttattttaaagaattgtaaactttatttttggtccagtggatggtcggtgtgtggccatgactgtctgtgagtggttgcatttctccacccttatcccttgactgtttacaggaacaatggtgaggtgtttgctctgtccttgtactatagattgccctttaacctctgtagccttctgcctggtgtgtttaacttgtctaaagtatggtatctttaaagctatttttttatttgtattttaatttgtattttttttctagttgagtatattatttatattgcattgtcttgtctgtgtgtgtgtgtaaaacttaataaacagagtttaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1322354 True 886 lncRNA 0.38 3 28046027 28057271

Neighbor

gene id symbol gene type direction distance location
LOC110487397 LOC106590567 coding upstream 10946 28024977 ~ 28035081 (+)
LOC118938251 NA coding upstream 95616 27944456 ~ 27950411 (+)
LOC110485128 LOC106595049 coding upstream 102251 27915251 ~ 27943776 (+)
LOC110487376 NA coding upstream 130271 27907785 ~ 27915756 (+)
LOC118938246 LOC106595566 coding upstream 180267 27863508 ~ 27865760 (+)
LOC118938252 LOC106566134 coding downstream 4495 28061766 ~ 28064668 (+)
LOC110487371 NA coding downstream 17698 28074969 ~ 28077602 (+)
LOC110487363 LOC106594826 coding downstream 123513 28180784 ~ 28201594 (+)
LOC118938258 NA coding downstream 279409 28336680 ~ 28337325 (+)
LOC110513252 NA coding downstream 281230 28338501 ~ 28698821 (+)
G1159469 NA non-coding upstream 126037 27846124 ~ 27919990 (+)
G1158375 NA non-coding upstream 193233 27851634 ~ 27852794 (+)
G1158371 NA non-coding upstream 231042 27814382 ~ 27814985 (+)
G1158351 NA non-coding upstream 234993 27810093 ~ 27811034 (+)
G1158343 NA non-coding upstream 244254 27800660 ~ 27801773 (+)
G1159667 NA non-coding downstream 140964 28198235 ~ 28198615 (+)
G1159656 NA non-coding downstream 145414 28202685 ~ 28203249 (+)
G1159675 NA non-coding downstream 161475 28218746 ~ 28267690 (+)
G1159679 NA non-coding downstream 175386 28232657 ~ 28262037 (+)
G1159688 NA non-coding downstream 210522 28267793 ~ 28269950 (+)
G1159435 NA other upstream 259862 27780222 ~ 27786165 (+)
LOC110485129 LOC106591690 other upstream 263677 27768154 ~ 27788573 (+)
G1158342 NA other upstream 277386 27493154 ~ 27768641 (+)
LOC110485126 NA other upstream 754809 27285432 ~ 27291404 (+)
G1159631 NA other downstream 62394 28119665 ~ 28125638 (+)
G1159684 NA other downstream 195259 28252530 ~ 28257974 (+)
LOC110487355 LOC106561190 other downstream 415405 28472333 ~ 28500669 (+)
G1159924 NA other downstream 761463 28818734 ~ 28819448 (+)

Expression


Co-expression Network