G1159667


Basic Information

Item Value
gene id G1159667
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28198235 ~ 28198615 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1322484
tgctcagtcagattatatgcaacacaggacagggTAGATAATGTCTTGtaataactacacatggttgatgataactcgtgattatgattgattgttttttataagataagtttaatgctagctagcaacttaccttggcttactgcatttgcgtaacaggcagtctccttgtggagtgcaacgagagagaggcaggtcgttattgcgttggactcgttaactgcaatgttgcaagattggATttctgcccctgaatgaggcagttaacccaccgttcctaggccgtcattgaaaatacgaatgtgttcttaactgacttgcctagttaaataaaggtgtaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1322484 True 347 lncRNA 0.40 2 28198235 28198615

Neighbor

gene id symbol gene type direction distance location
LOC110487371 NA coding upstream 120633 28074969 ~ 28077602 (+)
LOC118938252 LOC106566134 coding upstream 133567 28061766 ~ 28064668 (+)
LOC110487397 LOC106590567 coding upstream 163154 28024977 ~ 28035081 (+)
LOC118938251 NA coding upstream 247824 27944456 ~ 27950411 (+)
LOC110485128 LOC106595049 coding upstream 254459 27915251 ~ 27943776 (+)
LOC118938258 NA coding downstream 138065 28336680 ~ 28337325 (+)
LOC110513252 NA coding downstream 139886 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 coding downstream 273718 28472333 ~ 28500669 (+)
LOC110487378 LOC106613297 coding downstream 397350 28595965 ~ 28603570 (+)
LOC118938254 NA coding downstream 405974 28604589 ~ 28608693 (+)
G1159550 NA non-coding upstream 121200 28025055 ~ 28077035 (+)
G1159548 NA non-coding upstream 140964 28046027 ~ 28057271 (+)
G1159469 NA non-coding upstream 278245 27846124 ~ 27919990 (+)
G1158375 NA non-coding upstream 345441 27851634 ~ 27852794 (+)
G1158371 NA non-coding upstream 383250 27814382 ~ 27814985 (+)
G1159656 NA non-coding downstream 4070 28202685 ~ 28203249 (+)
G1159675 NA non-coding downstream 20131 28218746 ~ 28267690 (+)
G1159679 NA non-coding downstream 34042 28232657 ~ 28262037 (+)
G1159688 NA non-coding downstream 69178 28267793 ~ 28269950 (+)
G1159689 NA non-coding downstream 74098 28272713 ~ 28322202 (+)
G1159631 NA other upstream 72597 28119665 ~ 28125638 (+)
LOC118938246 LOC106595566 other upstream 332528 27863508 ~ 27865760 (+)
G1159435 NA other upstream 412070 27780222 ~ 27786165 (+)
LOC110485129 LOC106591690 other upstream 415885 27768154 ~ 27788573 (+)
G1158342 NA other upstream 429594 27493154 ~ 27768641 (+)
G1159684 NA other downstream 53915 28252530 ~ 28257974 (+)
G1159924 NA other downstream 620119 28818734 ~ 28819448 (+)
G1161908 NA other downstream 1100143 29298758 ~ 29299656 (+)

Expression


Co-expression Network