G1159679


Basic Information

Item Value
gene id G1159679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28232657 ~ 28262037 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1322517
atcaggattacaagaagaaaaaacaactagaggtgagatatctgcgttgatatcaggattacaagaagaaactacaactggaggtgagatatcttcatttttatcaggattacaagaagaaactacaactagatgtgagattgctgcattattatcaggattacaagaagaaacaacaacttcaggtgaaatatctgcattattatcaggattacaagaataaacaacaacttcaggtgagatatctgcattattatcaggattacaagaagacagagcaacttcaggtgaaatatctacgttattatcaggagtactagaagaaacaacaactagagatgagatccctgcattattatcaggataacaagaagaaacaacaacttgaggtgagatatctccattattataaggataacaagaagaaactacaactggaggtgagatatctgcatttttatcaggattacaagaagaaacaacaactagaggtgagatatctgcattat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1322517 True 509 lncRNA 0.34 2 28232657 28262037

Neighbor

gene id symbol gene type direction distance location
LOC110487363 LOC106594826 coding upstream 31063 28180784 ~ 28201594 (+)
LOC110487371 NA coding upstream 155055 28074969 ~ 28077602 (+)
LOC118938252 LOC106566134 coding upstream 167989 28061766 ~ 28064668 (+)
LOC110487397 LOC106590567 coding upstream 197576 28024977 ~ 28035081 (+)
LOC118938251 NA coding upstream 282246 27944456 ~ 27950411 (+)
LOC118938258 NA coding downstream 74643 28336680 ~ 28337325 (+)
LOC110513252 NA coding downstream 76464 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 coding downstream 210296 28472333 ~ 28500669 (+)
LOC110487378 LOC106613297 coding downstream 333928 28595965 ~ 28603570 (+)
LOC118938254 NA coding downstream 342552 28604589 ~ 28608693 (+)
G1159656 NA non-coding upstream 29408 28202685 ~ 28203249 (+)
G1159667 NA non-coding upstream 34042 28198235 ~ 28198615 (+)
G1159550 NA non-coding upstream 155622 28025055 ~ 28077035 (+)
G1159548 NA non-coding upstream 175386 28046027 ~ 28057271 (+)
G1158375 NA non-coding upstream 379863 27851634 ~ 27852794 (+)
G1159688 NA non-coding downstream 5756 28267793 ~ 28269950 (+)
G1159689 NA non-coding downstream 10676 28272713 ~ 28322202 (+)
G1159699 NA non-coding downstream 75453 28337490 ~ 28337800 (+)
G1159553 NA non-coding downstream 86607 28348644 ~ 28353676 (+)
G1159716 NA non-coding downstream 149529 28411566 ~ 28432077 (+)
G1159631 NA other upstream 107019 28119665 ~ 28125638 (+)
LOC118938246 LOC106595566 other upstream 366950 27863508 ~ 27865760 (+)
G1159435 NA other upstream 446492 27780222 ~ 27786165 (+)
LOC110485129 LOC106591690 other upstream 450307 27768154 ~ 27788573 (+)
G1158342 NA other upstream 464016 27493154 ~ 27768641 (+)
G1159924 NA other downstream 556697 28818734 ~ 28819448 (+)
G1161908 NA other downstream 1036721 29298758 ~ 29299656 (+)
si:ch211-126j24.1 LOC106585260 other downstream 1102015 29266618 ~ 29370947 (+)

Expression


Co-expression Network