G1159719


Basic Information

Item Value
gene id G1159719
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28412541 ~ 28438062 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1322563
ctattaaattatgacagaccagctagatctactgtctctagtatattttgacagaccagatagatctactgtatctattatattatgacagaccagctagacctactgtctctattatattatgacagaccagctagatctactgtctttattaaattatgacagaccagctagatctacattctctactatattatgaaagaccagctagatctactatcgctattatattatgacagaccagctagatctactgtagctattatattatgacagaccagctagatctactgtatctattatattatgacagaccagctagacctactgtccctattatattatgacagacgagctagatctactgtctctattttattatgacagaccagctagaattactgtatctactatattatgacagacaagctagatctactgtctctactatataatgacagaccagctagacctactggctctactatattatgacagaccagctagatctactgtctctataatattatgacagaccagctagatctactgtatctattatattatgacagaccagctagttctactttCTCTactgttttatgacagaccagctagatctactgtctctattatattagaacagaccagctagatctactgtctctactatattatgacagactagctattcctactgtccctattaaaatatgacagaccagcttgatctactctCCCtaataaattatgacagaccagctagatctactgtctctattatattactacAGCCCACAAACATcgactgtctttattatattacgacagaccagctagatctactgtctctactatattatgacagaccagctagatctactgtctatattatattagaacagaccagctagatctactgtctctactatattatgacagatcagctatacctactgtccctattaaattatgacagaccagctagatctactgtctctagtatattttgacagaccagatagatctactgtatctattatattatgacagaccagctagacctactgtctctattatattagaacagaccagctagatctaactacgctattatattatgaaagatcAGCTAGACCTACTTTTCCTATTAAAtgataacagaccagctagatctactgtctctattatattagaacagaccagctagatctactgtctctactatattttgacagatcagctagacctactgtccctattaaattatgacagaccagctagatctactgtctctagtatattttgacagaccagctagatctactgtatctattatattatgacagaccagctagacctactgtctctattatattatgaaagaccagctatatctactgtatctattctattatgacagaccagctagatctactgtctctactatgttatgacagatcagctagacctactgtccctattaaattatgagagaccagctatatctactgtatctattctattatgacagaccagctagacctactgtccatattaaattatgacagaccagctagatctactgtctctactatattatgacagaccagatatatctactgtatgttcgatagtattacagaccagccagatctactgtctctgttatattatgacagacgatctactgtctctattatattatgacagaccagctagacctactgtctctactatataatgacagaccagctagacctactggctctcctatattaagacagaccagctaggtctactgtctctattatattatgacagaccagctagacctactgtccatattaaattatgacagaccagctagatctactgtctctactatattatgacaggccagatagatctactgtacgTTCGATAGTattacagaccagccagatctactgtctctattatattatgacagacaatctactgtctcttttatattatgacagaccagctagatctactgtctctactatataatgacagaccagctagacctactggctctactatattatgaaagaccagctagatctactatctctattatatttgaacagaccagctagatctaccttctctactatattatgaaagaccagctagacctactttccctattaaattatgacagaccagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1322563 True 2195 lncRNA 0.36 3 28412541 28438062

Neighbor

gene id symbol gene type direction distance location
LOC110513252 NA coding upstream 64005 28338501 ~ 28698821 (+)
LOC118938258 NA coding upstream 75216 28336680 ~ 28337325 (+)
LOC110487363 LOC106594826 coding upstream 210947 28180784 ~ 28201594 (+)
LOC110487371 NA coding upstream 334939 28074969 ~ 28077602 (+)
LOC118938252 LOC106566134 coding upstream 347873 28061766 ~ 28064668 (+)
LOC110487355 LOC106561190 coding downstream 34271 28472333 ~ 28500669 (+)
LOC110487378 LOC106613297 coding downstream 157903 28595965 ~ 28603570 (+)
LOC118938254 NA coding downstream 166527 28604589 ~ 28608693 (+)
LOC110487366 NA coding downstream 269633 28707695 ~ 28713789 (+)
LOC118938259 LOC106566139 coding downstream 278756 28716818 ~ 28721736 (+)
G1159553 NA non-coding upstream 58865 28348644 ~ 28353676 (+)
G1159699 NA non-coding upstream 74741 28337490 ~ 28337800 (+)
G1159689 NA non-coding upstream 90339 28272713 ~ 28322202 (+)
G1159688 NA non-coding upstream 142591 28267793 ~ 28269950 (+)
G1159679 NA non-coding upstream 150504 28232657 ~ 28262037 (+)
G1159718 NA non-coding downstream 515 28438577 ~ 28446465 (+)
G1159717 NA non-coding downstream 8493 28446555 ~ 28453056 (+)
G1159715 NA non-coding downstream 20937 28458999 ~ 28468307 (+)
G1159741 NA non-coding downstream 40962 28479024 ~ 28494896 (+)
G1159742 NA non-coding downstream 45784 28483846 ~ 28485979 (+)
G1159684 NA other upstream 154567 28252530 ~ 28257974 (+)
G1159631 NA other upstream 286903 28119665 ~ 28125638 (+)
LOC118938246 LOC106595566 other upstream 546834 27863508 ~ 27865760 (+)
G1159435 NA other upstream 626376 27780222 ~ 27786165 (+)
LOC110485129 LOC106591690 other upstream 630191 27768154 ~ 27788573 (+)
G1159924 NA other downstream 380672 28818734 ~ 28819448 (+)
G1161908 NA other downstream 860696 29298758 ~ 29299656 (+)
si:ch211-126j24.1 LOC106585260 other downstream 925990 29266618 ~ 29370947 (+)
G1162364 NA other downstream 1056300 29494362 ~ 29494902 (+)

Expression


Co-expression Network