G1159741


Basic Information

Item Value
gene id G1159741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28479024 ~ 28494896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1322586
cctacagtaggtctttGTGGTTGTTAGCTGAAAttgtgggtcctacagtaggtctatgttattgttaggtgaagttatgggtcctacagtaggtcaaTGTTGTTAgttgaagttatgggtcctacagtagGTttatgttaggtgaagttatgggtcctacagtaggtctattttgttgttgttagGTGAacttatgggtcctacagtaggcctatgttgGTGTTAGGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1322586 True 231 lncRNA 0.41 3 28479024 28494896

Neighbor

gene id symbol gene type direction distance location
LOC110513252 NA coding upstream 130488 28338501 ~ 28698821 (+)
LOC118938258 NA coding upstream 141699 28336680 ~ 28337325 (+)
LOC110487363 LOC106594826 coding upstream 277430 28180784 ~ 28201594 (+)
LOC110487371 NA coding upstream 401422 28074969 ~ 28077602 (+)
LOC118938252 LOC106566134 coding upstream 414356 28061766 ~ 28064668 (+)
LOC110487378 LOC106613297 coding downstream 101069 28595965 ~ 28603570 (+)
LOC118938254 NA coding downstream 109693 28604589 ~ 28608693 (+)
LOC110487366 NA coding downstream 212799 28707695 ~ 28713789 (+)
LOC118938259 LOC106566139 coding downstream 221922 28716818 ~ 28721736 (+)
LOC118938260 LOC106593417 coding downstream 256616 28751512 ~ 28753479 (+)
G1159715 NA non-coding upstream 10717 28458999 ~ 28468307 (+)
G1159717 NA non-coding upstream 25968 28446555 ~ 28453056 (+)
G1159718 NA non-coding upstream 32559 28438577 ~ 28446465 (+)
G1159719 NA non-coding upstream 40962 28412541 ~ 28438062 (+)
G1159716 NA non-coding upstream 46947 28411566 ~ 28432077 (+)
G1159779 NA non-coding downstream 49650 28544546 ~ 28550485 (+)
G1159781 LOC106561441 non-coding downstream 56946 28551842 ~ 28552803 (+)
G1159821 NA non-coding downstream 135403 28630299 ~ 28632208 (+)
G1159547 NA non-coding downstream 165671 28660567 ~ 28700243 (+)
G1159847 NA non-coding downstream 175150 28670046 ~ 28671329 (+)
G1159684 NA other upstream 221050 28252530 ~ 28257974 (+)
G1159631 NA other upstream 353386 28119665 ~ 28125638 (+)
LOC118938246 LOC106595566 other upstream 613317 27863508 ~ 27865760 (+)
G1159435 NA other upstream 692859 27780222 ~ 27786165 (+)
LOC110485129 LOC106591690 other upstream 696674 27768154 ~ 27788573 (+)
G1159924 NA other downstream 323838 28818734 ~ 28819448 (+)
G1161908 NA other downstream 803862 29298758 ~ 29299656 (+)
si:ch211-126j24.1 LOC106585260 other downstream 869156 29266618 ~ 29370947 (+)
G1162364 NA other downstream 999466 29494362 ~ 29494902 (+)
G1162753 NA other downstream 1335858 29830754 ~ 29831296 (+)

Expression


Co-expression Network