G1159897 (LOC106591026)


Basic Information

Item Value
gene id G1159897
gene name LOC106591026
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28783430 ~ 28784093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1322761
TCAGAAATGTCCGCTGCTGATTTTTTTCCAGGTGTCCCTGGCCCTGTGAATATTGGCCGTGGACAAATTCTCAGTCAAAAACATAAGTCAGAACACAGCCTCTCTATTCTCTCGTGTGATTTCAGatcctctgactgggaaaatgtcTTTTCACAATGCGAGCAGTGGTATgtcttctcctcctgtgtattagtatgttggaaaggcttttctccagtgtgttTTCTCTCATGCTTTTTCAAACTCCCTGACCACCTAAAACTCTTTTCACACTGGGAACATTgaaaaggcttttctcctgtgtgtattctctcatgcgtTTTCAGGACCCATAACCacctaaaactctttccacagtgggagcagtgataaggcttctctcctgtgtgtgttctctcatgcccaACCAGGGCCCCTAACTGAGTAAAAttctttccacagtgggaacagTGGTAGGGCTTTtctcctgtatgtattctctcatgcATTTTCAGGCTCCCTAACCacctaaaactctttccacagtgggagcagtggtgttGGTTAGGCGTTTCCGGGTCTGTTTCCTCTGAGGAACTCT

Function

NR:

description
PREDICTED: zinc finger protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1322761 True 580 lncRNA 0.46 2 28783430 28784093

Neighbor

gene id symbol gene type direction distance location
LOC110485131 LOC106571816 coding upstream 8490 28768216 ~ 28774940 (+)
LOC118938260 LOC106593417 coding upstream 29951 28751512 ~ 28753479 (+)
LOC118938259 LOC106566139 coding upstream 61694 28716818 ~ 28721736 (+)
LOC110487366 NA coding upstream 69641 28707695 ~ 28713789 (+)
LOC118938254 NA coding upstream 174737 28604589 ~ 28608693 (+)
LOC110486062 LOC106585334 coding downstream 75442 28859535 ~ 28860605 (+)
rrp36 rrp36 coding downstream 384308 29168401 ~ 29172521 (+)
si:ch211-126j24.1 LOC106585260 coding downstream 482525 29266618 ~ 29370947 (+)
LOC110486069 klc4 coding downstream 589208 29373301 ~ 29409473 (+)
LOC110486070 hebp1 coding downstream 635270 29419363 ~ 29436445 (+)
G1159849 NA non-coding upstream 3105 28672650 ~ 28780325 (+)
G1159893 NA non-coding upstream 19310 28763706 ~ 28764120 (+)
G1159562 NA non-coding upstream 57017 28725909 ~ 28726413 (+)
G1159547 NA non-coding upstream 83187 28660567 ~ 28700243 (+)
G1159901 NA non-coding downstream 2454 28786547 ~ 28788374 (+)
G1159915 NA non-coding downstream 19162 28803255 ~ 28803498 (+)
G1159922 LOC106586027 non-coding downstream 30072 28814165 ~ 28814490 (+)
G1159923 NA non-coding downstream 34179 28818272 ~ 28836620 (+)
G1161564 NA non-coding downstream 54400 28838493 ~ 28839683 (+)
LOC110513252 NA other upstream 84609 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 other upstream 284224 28472333 ~ 28500669 (+)
G1159684 NA other upstream 525456 28252530 ~ 28257974 (+)
G1159631 NA other upstream 657792 28119665 ~ 28125638 (+)
LOC118938246 LOC106595566 other upstream 917723 27863508 ~ 27865760 (+)
G1159924 NA other downstream 34641 28818734 ~ 28819448 (+)
G1161908 NA other downstream 514665 29298758 ~ 29299656 (+)
G1162364 NA other downstream 710269 29494362 ~ 29494902 (+)
G1162753 NA other downstream 1046661 29830754 ~ 29831296 (+)

Expression


Co-expression Network