G1161768


Basic Information

Item Value
gene id G1161768
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 29172755 ~ 29173426 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1324920
agtaattaatttgcattttattgcatgacataagtatttgatacatcagaaaagcagaacttaatatttggtacagaaacctttgtttgcaattacagagatcataggtttcctgtagttcttgaccaggtttgcacacaccctccatacagaccttctacagatccttcaggtttcggggctgtcgctgggcaatacggactttcagctccctccaaagattttctattgggttcaggtctggagagtgGCTAGGcccctccaggaccttgagatgcttcttacggagccactcctttgttgccctggctatgtgtttcgggttgttgtcatgctggaagaacaagccacgacccatcttcaatgctcttactgagggaaggaggttgatggccaagatctcgtgatatatggccccatccatcctcccctcaatactgtgaagtcgtcctgtcccctttgcagaaaagcatccccaaagaatgatgtttccacctccatgcttcatggttgggatagtgttcttggggttgtactcatccttcttcttcctccaaacacggcgagtggagtttagacaaaaaaagctatatttttgtttcatcagaccacatgaccttctcccattcctcctctggatcatccagatggtcattggcaaacttcagatgg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1324920 True 672 lncRNA 0.46 1 29172755 29173426

Neighbor

gene id symbol gene type direction distance location
rrp36 rrp36 coding upstream 234 29168401 ~ 29172521 (+)
LOC110486062 LOC106585334 coding upstream 312150 28859535 ~ 28860605 (+)
LOC110485131 LOC106571816 coding upstream 397815 28768216 ~ 28774940 (+)
LOC118938260 LOC106593417 coding upstream 419276 28751512 ~ 28753479 (+)
LOC118938259 LOC106566139 coding upstream 451019 28716818 ~ 28721736 (+)
si:ch211-126j24.1 LOC106585260 coding downstream 93192 29266618 ~ 29370947 (+)
LOC110486069 klc4 coding downstream 199875 29373301 ~ 29409473 (+)
LOC110486070 hebp1 coding downstream 245937 29419363 ~ 29436445 (+)
LOC110486071 LOC106564807 coding downstream 270697 29444123 ~ 29485813 (+)
LOC110486072 LOC106585018 coding downstream 324636 29498062 ~ 29591905 (+)
G1161821 NA non-coding upstream 7518 29165036 ~ 29165237 (+)
G1161592 NA non-coding upstream 313649 28858872 ~ 28859106 (+)
G1161567 NA non-coding upstream 331158 28841377 ~ 28841597 (+)
G1161564 NA non-coding upstream 333072 28838493 ~ 28839683 (+)
G1159923 NA non-coding upstream 336135 28818272 ~ 28836620 (+)
G1161822 NA non-coding downstream 3872 29177298 ~ 29177894 (+)
G1161823 NA non-coding downstream 5664 29179090 ~ 29179331 (+)
G1161825 NA non-coding downstream 8650 29182076 ~ 29182279 (+)
G1161833 NA non-coding downstream 22190 29195616 ~ 29195821 (+)
G1161837 NA non-coding downstream 24858 29198284 ~ 29198533 (+)
G1159924 NA other upstream 353307 28818734 ~ 28819448 (+)
LOC110513252 NA other upstream 473934 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 other upstream 673549 28472333 ~ 28500669 (+)
G1159684 NA other upstream 914781 28252530 ~ 28257974 (+)
G1159631 NA other upstream 1047117 28119665 ~ 28125638 (+)
G1161908 NA other downstream 125332 29298758 ~ 29299656 (+)
G1162364 NA other downstream 320936 29494362 ~ 29494902 (+)
G1162753 NA other downstream 657328 29830754 ~ 29831296 (+)
LOC110486104 chchd5 other downstream 1940885 31113781 ~ 31119681 (+)

Expression


Co-expression Network