G1161898


Basic Information

Item Value
gene id G1161898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 29292321 ~ 29292631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1325066
cagcacagtgggtcgtcgaggatttcgtactgaggaaagtcGTATTGCATGATCATGAATGTGCTGGTtatcataccgctgctgccatttcaatggcatttgagaacatgtttgaaacatgaacacacttgcctgctccattcgaacaactgactcgaATTAAGCTCATCAACTGCGCTTGCAGCAgatgtgataccctctgtcatggcattgaaacgcctgctcaacaaaactgccattacaggctgtgaacaagcgattcggtggcaTTCTATCTTTACTGTGTTGCCACCATGCTAGATGCTATGTAC

Function

NR:

description
zinc finger BED domain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1325066 True 311 lncRNA 0.46 1 29292321 29292631

Neighbor

gene id symbol gene type direction distance location
rrp36 rrp36 coding upstream 119800 29168401 ~ 29172521 (+)
LOC110486062 LOC106585334 coding upstream 431716 28859535 ~ 28860605 (+)
LOC110485131 LOC106571816 coding upstream 517381 28768216 ~ 28774940 (+)
LOC118938260 LOC106593417 coding upstream 538842 28751512 ~ 28753479 (+)
LOC118938259 LOC106566139 coding upstream 570585 28716818 ~ 28721736 (+)
LOC110486069 klc4 coding downstream 80670 29373301 ~ 29409473 (+)
LOC110486070 hebp1 coding downstream 126732 29419363 ~ 29436445 (+)
LOC110486071 LOC106564807 coding downstream 151492 29444123 ~ 29485813 (+)
LOC110486072 LOC106585018 coding downstream 205431 29498062 ~ 29591905 (+)
LOC110486077 LOC106564801 coding downstream 362925 29655556 ~ 29706148 (+)
G1161894 NA non-coding upstream 7404 29284634 ~ 29284917 (+)
G1161893 NA non-coding upstream 9205 29282890 ~ 29283116 (+)
G1161837 NA non-coding upstream 93788 29198284 ~ 29198533 (+)
G1161833 NA non-coding upstream 96500 29195616 ~ 29195821 (+)
G1161825 NA non-coding upstream 110042 29182076 ~ 29182279 (+)
G1161914 NA non-coding downstream 11644 29304275 ~ 29304501 (+)
G1161915 NA non-coding downstream 12792 29305423 ~ 29305725 (+)
si:ch211-126j24.1 LOC106585260 non-coding downstream 20887 29266618 ~ 29370947 (+)
G1161931 NA non-coding downstream 54598 29347229 ~ 29347532 (+)
G1161933 NA non-coding downstream 55527 29348158 ~ 29348422 (+)
G1159924 NA other upstream 472873 28818734 ~ 28819448 (+)
LOC110513252 NA other upstream 593500 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 other upstream 793115 28472333 ~ 28500669 (+)
G1159684 NA other upstream 1034347 28252530 ~ 28257974 (+)
G1159631 NA other upstream 1166683 28119665 ~ 28125638 (+)
G1161908 NA other downstream 6127 29298758 ~ 29299656 (+)
G1162364 NA other downstream 201731 29494362 ~ 29494902 (+)
G1162753 NA other downstream 538123 29830754 ~ 29831296 (+)
LOC110486104 chchd5 other downstream 1821680 31113781 ~ 31119681 (+)

Expression


Co-expression Network