G1161915


Basic Information

Item Value
gene id G1161915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 29305423 ~ 29305725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1325083
gaggTGGCTGTGTGTGGGTCCGAGGATGTGTGTTTTTTTAAGTATAAGACTGTTGAAAGTGCTTGCATTTCCattgtattgtttttgtgcatGTATATGTGTTGGAGTAAGGGTCTGTAGTCATGGAGAATTGGAAAGTGAATGTTTTTCTACTGCTGACCAAGGTTGCCACCCCATcacagagagtgtgagagtgaaaAGGGGAGAGAAAACACATTCATTCAACCCCAGCTCTACTTTCTCCTCCAAATGCACTAGAATGGAAGAATAGGAGCAGTCTCTAGCTTCCTGTATGACTCATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1325083 True 303 lncRNA 0.43 1 29305423 29305725

Neighbor

gene id symbol gene type direction distance location
rrp36 rrp36 coding upstream 132902 29168401 ~ 29172521 (+)
LOC110486062 LOC106585334 coding upstream 444818 28859535 ~ 28860605 (+)
LOC110485131 LOC106571816 coding upstream 530483 28768216 ~ 28774940 (+)
LOC118938260 LOC106593417 coding upstream 551944 28751512 ~ 28753479 (+)
LOC118938259 LOC106566139 coding upstream 583687 28716818 ~ 28721736 (+)
LOC110486069 klc4 coding downstream 67576 29373301 ~ 29409473 (+)
LOC110486070 hebp1 coding downstream 113638 29419363 ~ 29436445 (+)
LOC110486071 LOC106564807 coding downstream 138398 29444123 ~ 29485813 (+)
LOC110486072 LOC106585018 coding downstream 192337 29498062 ~ 29591905 (+)
LOC110486077 LOC106564801 coding downstream 349831 29655556 ~ 29706148 (+)
G1161914 NA non-coding upstream 922 29304275 ~ 29304501 (+)
G1161898 NA non-coding upstream 12792 29292321 ~ 29292631 (+)
G1161894 NA non-coding upstream 20506 29284634 ~ 29284917 (+)
G1161893 NA non-coding upstream 22307 29282890 ~ 29283116 (+)
G1161837 NA non-coding upstream 106890 29198284 ~ 29198533 (+)
si:ch211-126j24.1 LOC106585260 non-coding downstream 7793 29266618 ~ 29370947 (+)
G1161931 NA non-coding downstream 41504 29347229 ~ 29347532 (+)
G1161933 NA non-coding downstream 42433 29348158 ~ 29348422 (+)
G1161937 NA non-coding downstream 56081 29361806 ~ 29362159 (+)
G1161908 NA other upstream 5767 29298758 ~ 29299656 (+)
G1159924 NA other upstream 485975 28818734 ~ 28819448 (+)
LOC110513252 NA other upstream 606602 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 other upstream 806217 28472333 ~ 28500669 (+)
G1159684 NA other upstream 1047449 28252530 ~ 28257974 (+)
G1162364 NA other downstream 188637 29494362 ~ 29494902 (+)
G1162753 NA other downstream 525029 29830754 ~ 29831296 (+)
LOC110486104 chchd5 other downstream 1808586 31113781 ~ 31119681 (+)
LOC110486134 LOC106600876 other downstream 2696026 32001741 ~ 32159164 (+)

Expression


Co-expression Network