G1163814


Basic Information

Item Value
gene id G1163814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 30898145 ~ 30898632 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1327255
gggggagagtttgggctaaattatagatgggctatgtacaggtgcagtaatctgtgagctgctctgacagctggtgcttaaagctagtagtgagggggataagtgtttccagtttcagagatttttgcagttcgttccagtcataggcagcagagaactggaaggagaggcggccaaagtaagaattggttttgggggtgaccagagagatatacctgctggagcacgtgctacaggtgggtgctgctatggtgaccagcgaggtaagataagggggaactttacctagcagggtcttgtagatgacctggagccagtgggtttggcgacgagtatgaagcgagggccagccaacgagagcgtacaggtcgcagtggtgggtagtatattatagtattatagtattcagaagctagttagcttatttactggctaatcgttagtactcagctaaccacggtttgtggtcatcggctgtcctttggctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1327255 True 488 lncRNA 0.49 1 30898145 30898632

Neighbor

gene id symbol gene type direction distance location
LOC110486099 NA coding upstream 45541 30850580 ~ 30852604 (+)
LOC110486087 LOC106584892 coding upstream 299442 30579918 ~ 30598703 (+)
LOC118938065 LOC106564780 coding upstream 345492 30523932 ~ 30552653 (+)
LOC110486082 LOC106584819 coding upstream 615100 30264043 ~ 30283045 (+)
LOC110486081 LOC106584808 coding upstream 658899 30177711 ~ 30239246 (+)
LOC110485141 LOC106600922 coding downstream 6166 30904798 ~ 30962319 (+)
LOC110486104 chchd5 coding downstream 215149 31113781 ~ 31119681 (+)
LOC110486108 LOC106607428 coding downstream 342268 31240900 ~ 31243127 (+)
LOC110486110 LOC106607429 coding downstream 345233 31243865 ~ 31250082 (+)
LOC110486114 NA coding downstream 369190 31267822 ~ 31270431 (+)
G1163799 syf1 non-coding upstream 58695 30838494 ~ 30839450 (+)
G1163785 NA non-coding upstream 75432 30822511 ~ 30822713 (+)
G1163783 NA non-coding upstream 76731 30821017 ~ 30821414 (+)
G1163744 NA non-coding upstream 101420 30796501 ~ 30796725 (+)
G1163854 NA non-coding downstream 87330 30985962 ~ 31085331 (+)
G1163914 NA non-coding downstream 176826 31075458 ~ 31076511 (+)
G1163962 NA non-coding downstream 249648 31148280 ~ 31148666 (+)
G1163989 NA non-coding downstream 291345 31189977 ~ 31254788 (+)
G1162753 NA other upstream 1066849 29830754 ~ 29831296 (+)
G1162364 NA other upstream 1403243 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 1527198 29266618 ~ 29370947 (+)
G1161908 NA other upstream 1598489 29298758 ~ 29299656 (+)
G1159924 NA other upstream 2078697 28818734 ~ 28819448 (+)
LOC110486134 LOC106600876 other downstream 1103119 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 1816624 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 2330481 33001356 ~ 33230495 (+)
G1166318 NA other downstream 2341321 33239953 ~ 33249208 (+)

Expression


Co-expression Network