G1163914


Basic Information

Item Value
gene id G1163914
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 31075458 ~ 31076511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1327366
attggtggctgactaaatacttttttgccccacagtaTGGTTTCCTACCAATCACAACTTCAGTACATGCATTACATGGATGTCACAGGTTCTTTCGCAATACTATTTCCTCGATTCCTTATGTCCTTTCCTCCTAAAAAATGTCTGTCGGGAACTGATGAAAGGACTCAAGGAAAACAAACGCTTCCCTCTGACGTTTtgaggaggcagggaggagaggacaaaAGGAACTGAAGGAGGAAAAACTATCAAGAGAAAGCACTACAGTGTTTTTCCCGCCATGTGACCTTTCACCTTTGACCTGGATATGAAGAGAAAGCAGCCAGCCAATAGCAGGCCCTGTAGGGTGGCCTGGAAGTCACTGAACTTGACCCCCTCCAGGTAGAGGACAGACTGGCTGTAGGCCAGCACCAGGGCGTTCAGTGCCAGGATCTTAAACATCTGTAGTGTGGTCACCAGCGTACAGCGGCCCTGCTTTATCACGTGGCAGACTAGGCAGGAGGAGATGACAAAGAGGGAGacagtgtgtgagggagagagacagtgagtgagtgagtgagtgagtgagtgagtgagtgagtgagtgagtgttaaTTTGTGTTTGTATACAGTGTGGgtgtaaacaaaaacacacattttataaaaaaataaaatgtgtatTGATTATGTGTATGTATGTTCCTCACTGCACTGTATGGAGGATAATTTGGAGGTGAAGGGGGCAGCAATGGAGGCATCTCCCAGTTTCACTACTTGTATCTGATCTTCTTCCAGCTCCCTTAAGACTTGACTAATCCTCTCCTACAACAGAATTAACACCAAATGGTTTACAACACGCACaatcacctctccctccctccctcccccaacacacacacaccaccttctgTGCGGCtagctgctcctctctctgggCCATGACCCTTTGCCTGGCTGCCCTGGAGGTCAGTTTGACCCCTGAGTCGGCTGCTGgggtctccttctctctgcccctcttcctcctctcaggCATACGCTCTGGAGCGTTGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1327366 True 1030 lncRNA 0.49 2 31075458 31076511

Neighbor

gene id symbol gene type direction distance location
LOC110485141 LOC106600922 coding upstream 113139 30904798 ~ 30962319 (+)
LOC110486099 NA coding upstream 222854 30850580 ~ 30852604 (+)
LOC110486087 LOC106584892 coding upstream 476755 30579918 ~ 30598703 (+)
LOC118938065 LOC106564780 coding upstream 522805 30523932 ~ 30552653 (+)
LOC110486082 LOC106584819 coding upstream 792413 30264043 ~ 30283045 (+)
LOC110486104 chchd5 coding downstream 37270 31113781 ~ 31119681 (+)
LOC110486108 LOC106607428 coding downstream 164389 31240900 ~ 31243127 (+)
LOC110486110 LOC106607429 coding downstream 167354 31243865 ~ 31250082 (+)
LOC110486114 NA coding downstream 191311 31267822 ~ 31270431 (+)
LOC110486119 LOC106600898 coding downstream 332615 31409126 ~ 31442138 (+)
G1163814 NA non-coding upstream 176826 30898145 ~ 30898632 (+)
G1163799 syf1 non-coding upstream 236008 30838494 ~ 30839450 (+)
G1163785 NA non-coding upstream 252745 30822511 ~ 30822713 (+)
G1163962 NA non-coding downstream 71769 31148280 ~ 31148666 (+)
G1163989 NA non-coding downstream 113466 31189977 ~ 31254788 (+)
G1164069 NA non-coding downstream 252241 31328752 ~ 31338410 (+)
G1164055 NA non-coding downstream 254546 31331057 ~ 31335655 (+)
G1164076 NA non-coding downstream 278684 31355195 ~ 31357298 (+)
G1162753 NA other upstream 1244162 29830754 ~ 29831296 (+)
G1162364 NA other upstream 1580556 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 1704511 29266618 ~ 29370947 (+)
G1161908 NA other upstream 1775802 29298758 ~ 29299656 (+)
G1159924 NA other upstream 2256010 28818734 ~ 28819448 (+)
LOC110486134 LOC106600876 other downstream 925240 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 1638745 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 2152602 33001356 ~ 33230495 (+)
G1166318 NA other downstream 2163442 33239953 ~ 33249208 (+)

Expression


Co-expression Network