G1164119


Basic Information

Item Value
gene id G1164119
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 31437305 ~ 31496657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1327605
agggagcgctgagaaaggatggctcccactcccacctctgacgcgtcaacctcgacaacaaactgtctagagacgtcaggtgtaacaaggataggagcggatgtaaaacgattcttgaggagatcaaaagctccctgggcggaaacggaccactcaaagcacgtcttgacagaagtaagggctgtgagaggagctgccacctgaccgaaattacggatgaaacgacgatagaagttcgcgaagccgagaaagcgctgcagctcgacgcgtgacttagggacgggccaatcaatgacagcttggactttagcgggatccatcttaatgccttcagcggaaataacag

Function

NR:

description
PREDICTED: uncharacterized mitochondrial protein AtMg00860-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1327605 True 346 lncRNA 0.53 2 31437305 31496657

Neighbor

gene id symbol gene type direction distance location
LOC110486114 NA coding upstream 166874 31267822 ~ 31270431 (+)
LOC110486110 LOC106607429 coding upstream 187223 31243865 ~ 31250082 (+)
LOC110486108 LOC106607428 coding upstream 194178 31240900 ~ 31243127 (+)
LOC110486104 chchd5 coding upstream 317624 31113781 ~ 31119681 (+)
LOC110485141 LOC106600922 coding upstream 474986 30904798 ~ 30962319 (+)
LOC110486128 LOC106607447 coding downstream 145725 31642382 ~ 31649841 (+)
LOC110486130 LOC106607449 coding downstream 169583 31666240 ~ 31673890 (+)
LOC110486131 LOC105029658 coding downstream 187817 31684474 ~ 31690205 (+)
LOC110487528 tex33 coding downstream 194876 31691533 ~ 31692268 (+)
il2rb2 il2rb2 coding downstream 205307 31701964 ~ 31709740 (+)
G1164076 NA non-coding upstream 80007 31355195 ~ 31357298 (+)
G1164069 NA non-coding upstream 98895 31328752 ~ 31338410 (+)
G1164055 NA non-coding upstream 101650 31331057 ~ 31335655 (+)
G1163989 NA non-coding upstream 182517 31189977 ~ 31254788 (+)
G1163962 NA non-coding upstream 288639 31148280 ~ 31148666 (+)
LOC110486123 LOC106607440 non-coding downstream 13143 31489817 ~ 31513332 (+)
G1164530 NA non-coding downstream 26942 31523599 ~ 31524049 (+)
G1164537 NA non-coding downstream 29622 31526279 ~ 31526494 (+)
G1164540 NA non-coding downstream 34362 31531019 ~ 31533656 (+)
G1164541 NA non-coding downstream 37245 31533902 ~ 31534108 (+)
G1162753 NA other upstream 1606009 29830754 ~ 29831296 (+)
G1162364 NA other upstream 1942403 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 2066358 29266618 ~ 29370947 (+)
G1161908 NA other upstream 2137649 29298758 ~ 29299656 (+)
LOC110486134 LOC106600876 other downstream 505094 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 1218599 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 1732456 33001356 ~ 33230495 (+)
G1166318 NA other downstream 1743296 33239953 ~ 33249208 (+)
G1166779 NA other downstream 2293983 33790640 ~ 33803665 (+)

Expression


Co-expression Network