Gene
RNA
| Item | Value |
|---|---|
| gene id | G1164542 |
| gene name | LOC106607441 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 31534214 ~ 31534947 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative uncharacterized protein DDB_G0291608 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1328095 | True | 734 | lncRNA | 0.53 | 1 | 31534214 | 31534947 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486123 | LOC106607440 | coding | upstream | 22485 | 31489817 ~ 31513332 (+) |
| LOC110486119 | LOC106600898 | coding | upstream | 92076 | 31409126 ~ 31442138 (+) |
| LOC110486114 | NA | coding | upstream | 263783 | 31267822 ~ 31270431 (+) |
| LOC110486110 | LOC106607429 | coding | upstream | 284132 | 31243865 ~ 31250082 (+) |
| LOC110486108 | LOC106607428 | coding | upstream | 291087 | 31240900 ~ 31243127 (+) |
| LOC110486128 | LOC106607447 | coding | downstream | 107435 | 31642382 ~ 31649841 (+) |
| LOC110486130 | LOC106607449 | coding | downstream | 131293 | 31666240 ~ 31673890 (+) |
| LOC110486131 | LOC105029658 | coding | downstream | 149527 | 31684474 ~ 31690205 (+) |
| LOC110487528 | tex33 | coding | downstream | 156586 | 31691533 ~ 31692268 (+) |
| il2rb2 | il2rb2 | coding | downstream | 167017 | 31701964 ~ 31709740 (+) |
| G1164541 | NA | non-coding | upstream | 106 | 31533902 ~ 31534108 (+) |
| G1164540 | NA | non-coding | upstream | 558 | 31531019 ~ 31533656 (+) |
| G1164537 | NA | non-coding | upstream | 7720 | 31526279 ~ 31526494 (+) |
| G1164530 | NA | non-coding | upstream | 10165 | 31523599 ~ 31524049 (+) |
| G1164551 | NA | non-coding | downstream | 11351 | 31546298 ~ 31546519 (+) |
| G1164552 | NA | non-coding | downstream | 12342 | 31547289 ~ 31547683 (+) |
| G1164572 | NA | non-coding | downstream | 39769 | 31574716 ~ 31574983 (+) |
| G1164582 | NA | non-coding | downstream | 47358 | 31582305 ~ 31582862 (+) |
| G1164583 | NA | non-coding | downstream | 48511 | 31583458 ~ 31584508 (+) |
| LOC110486104 | chchd5 | other | upstream | 414537 | 31113781 ~ 31119681 (+) |
| G1162753 | NA | other | upstream | 1702918 | 29830754 ~ 29831296 (+) |
| G1162364 | NA | other | upstream | 2039312 | 29494362 ~ 29494902 (+) |
| si:ch211-126j24.1 | LOC106585260 | other | upstream | 2163267 | 29266618 ~ 29370947 (+) |
| G1161908 | NA | other | upstream | 2234558 | 29298758 ~ 29299656 (+) |
| LOC110486134 | LOC106600876 | other | downstream | 466804 | 32001741 ~ 32159164 (+) |
| ifn2 | ifn2 | other | downstream | 1180309 | 32714937 ~ 32722676 (+) |
| LOC110486146 | LOC106607468 | other | downstream | 1694166 | 33001356 ~ 33230495 (+) |
| G1166318 | NA | other | downstream | 1705006 | 33239953 ~ 33249208 (+) |
| G1166779 | NA | other | downstream | 2255693 | 33790640 ~ 33803665 (+) |
