G1164582


Basic Information

Item Value
gene id G1164582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 31582305 ~ 31582862 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1328135
AGGCCACTTCAAATGGTGACTATCCCAGAAAAATGAAACACAGATGTCTGCAATGATCTTTGAGGTGTATTGACGGGACAAACAAACCGTTTTACAATCGGGCATGTCAGACACCTGCCTCAGAGCCTTAGACAGGAAACTGTCAGAGGCACCTGTAACCTGGCAACGGAGTGGAATAGTCAAACAAAACAAAGGTTAATGTTGGATGTTGAAGTGAGTATAGGCTTGGTGGTGCCACCATGTGGTAGAATTGATTAAGTGCAGTACAGCTCCTCTGCATCACCCTCACACTCAGATTCCTGTAACAGTGAAAGCAATACTATGTGACAACAGAGGAACGAAACATAACATCCACCACTGCAGCAGTCAAAACATTGAAGACAAATTCTCCCCTTTCaacagaaaaaaagatgtagGCTCTAGGTGAATAGATGCTGCAGACTACTTACTCCCAAGCAAATCTTGACCTGTATTTTCTGCAGTAATGCTCAGGGTTGACTTGAGACACCATGTAGCATGCTGTCTTTCTAATGCAGCGTGAATCAGTCAGTCTTCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1328135 True 558 lncRNA 0.44 1 31582305 31582862

Neighbor

gene id symbol gene type direction distance location
LOC110486123 LOC106607440 coding upstream 70576 31489817 ~ 31513332 (+)
LOC110486119 LOC106600898 coding upstream 140167 31409126 ~ 31442138 (+)
LOC110486114 NA coding upstream 311874 31267822 ~ 31270431 (+)
LOC110486110 LOC106607429 coding upstream 332223 31243865 ~ 31250082 (+)
LOC110486108 LOC106607428 coding upstream 339178 31240900 ~ 31243127 (+)
LOC110486128 LOC106607447 coding downstream 59520 31642382 ~ 31649841 (+)
LOC110486130 LOC106607449 coding downstream 83378 31666240 ~ 31673890 (+)
LOC110486131 LOC105029658 coding downstream 101612 31684474 ~ 31690205 (+)
LOC110487528 tex33 coding downstream 108671 31691533 ~ 31692268 (+)
il2rb2 il2rb2 coding downstream 119102 31701964 ~ 31709740 (+)
G1164572 NA non-coding upstream 7322 31574716 ~ 31574983 (+)
G1164552 NA non-coding upstream 34622 31547289 ~ 31547683 (+)
G1164551 NA non-coding upstream 35786 31546298 ~ 31546519 (+)
G1164542 LOC106607441 non-coding upstream 47358 31534214 ~ 31534947 (+)
G1164541 NA non-coding upstream 48197 31533902 ~ 31534108 (+)
G1164583 NA non-coding downstream 596 31583458 ~ 31584508 (+)
G1164591 NA non-coding downstream 9349 31592211 ~ 31593294 (+)
G1164604 NA non-coding downstream 40136 31622998 ~ 31623271 (+)
G1164612 NA non-coding downstream 52656 31635518 ~ 31635859 (+)
G1164618 NA non-coding downstream 71453 31654315 ~ 31654703 (+)
LOC110486104 chchd5 other upstream 462628 31113781 ~ 31119681 (+)
G1162753 NA other upstream 1751009 29830754 ~ 29831296 (+)
G1162364 NA other upstream 2087403 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 2211358 29266618 ~ 29370947 (+)
G1161908 NA other upstream 2282649 29298758 ~ 29299656 (+)
LOC110486134 LOC106600876 other downstream 418889 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 1132394 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 1646251 33001356 ~ 33230495 (+)
G1166318 NA other downstream 1657091 33239953 ~ 33249208 (+)
G1166779 NA other downstream 2207778 33790640 ~ 33803665 (+)

Expression


Co-expression Network