G1164591


Basic Information

Item Value
gene id G1164591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 31592211 ~ 31593294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1328144
TTTTGCTTAGTGAATCATACATTAAGTTAGGAAAATACAGTTTTGGAACAGTATGAAATATATAGACGTGGGGCCTGAAATATTTCAGAGATTTCATATGTATATGTTCTAACTCTGCTAGTTTCACATTACATCATTACAAACTCACTGACTTCTGATTTCAGTCTTTTATTGTCGTACAGTAAAGCATGCAATGTCAGTCATGAGGTTTATTTTGGTGTGTAACAGTATGTGTTTGTTTTAGTGAGAAGGCCACTCCTAACTTGCTAAACAATATTTCAGAATTGGTTTAAATTAAGTCAGGGTTAAATTAAGGGTGGGTTTTAGTATTTTGGCTAGTCGTTTTACAGGTCAGGATTGTCCCCCATTTTAGAGCTCCAGCTCGATCTTGACGTCAATCTCGGCCTTGTAAGGTTCCAGCAGAGGGCGTACCTCCTCAGAGAGAAACCTCGCCacctgGTTGGGGGGCGCGGCCGATGAAGGTCTTGGGGTCCAGGATGTTGTCTAGATGGCCCAGGATAGGGGCGAAGTAGGGGTCAGCCTGGACCCTGGCCAAAAGGTCATTGTCCCCCCCCTCCTGTTTGACCACAGTTGCAGCCTGCTGGGACAACACACGGATCTTCTCGTGGCAGTCCTGGTGAAAGAACACAAATACGAGAAACTGTTACTGTGTGATTACACAATAATAAACTGAACATAAATtacaaatgcaacatgcaacaatttcaaagactttgactgagaatacagatacgcatctgttggccacagatgtagagtggatcagaaaaccagtcagtttctggtgtgaccacc

Function

NR:

description
adenylosuccinate lyase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1328144 True 816 lncRNA 0.43 2 31592211 31593294

Neighbor

gene id symbol gene type direction distance location
LOC110486123 LOC106607440 coding upstream 80482 31489817 ~ 31513332 (+)
LOC110486119 LOC106600898 coding upstream 150073 31409126 ~ 31442138 (+)
LOC110486114 NA coding upstream 321780 31267822 ~ 31270431 (+)
LOC110486110 LOC106607429 coding upstream 342129 31243865 ~ 31250082 (+)
LOC110486108 LOC106607428 coding upstream 349084 31240900 ~ 31243127 (+)
LOC110486128 LOC106607447 coding downstream 49088 31642382 ~ 31649841 (+)
LOC110486130 LOC106607449 coding downstream 72946 31666240 ~ 31673890 (+)
LOC110486131 LOC105029658 coding downstream 91180 31684474 ~ 31690205 (+)
LOC110487528 tex33 coding downstream 98239 31691533 ~ 31692268 (+)
il2rb2 il2rb2 coding downstream 108670 31701964 ~ 31709740 (+)
G1164583 NA non-coding upstream 7703 31583458 ~ 31584508 (+)
G1164582 NA non-coding upstream 9349 31582305 ~ 31582862 (+)
G1164572 NA non-coding upstream 17228 31574716 ~ 31574983 (+)
G1164552 NA non-coding upstream 44528 31547289 ~ 31547683 (+)
G1164551 NA non-coding upstream 45692 31546298 ~ 31546519 (+)
G1164604 NA non-coding downstream 29704 31622998 ~ 31623271 (+)
G1164612 NA non-coding downstream 42224 31635518 ~ 31635859 (+)
G1164618 NA non-coding downstream 61021 31654315 ~ 31654703 (+)
G1164620 NA non-coding downstream 124214 31717508 ~ 31807548 (+)
G1164619 NA non-coding downstream 125309 31718603 ~ 31810999 (+)
LOC110486104 chchd5 other upstream 472534 31113781 ~ 31119681 (+)
G1162753 NA other upstream 1760915 29830754 ~ 29831296 (+)
G1162364 NA other upstream 2097309 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 2221264 29266618 ~ 29370947 (+)
G1161908 NA other upstream 2292555 29298758 ~ 29299656 (+)
LOC110486134 LOC106600876 other downstream 408457 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 1121962 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 1635819 33001356 ~ 33230495 (+)
G1166318 NA other downstream 1646659 33239953 ~ 33249208 (+)
G1166779 NA other downstream 2197346 33790640 ~ 33803665 (+)

Expression


Co-expression Network