G1164612


Basic Information

Item Value
gene id G1164612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 31635518 ~ 31635859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1328168
gtgtagtctggcccaggagtgtgaaggtgaacagaaaggctctggagcaacaaaccgcccttgctgtctctgcctggccggttcccctctttccactgggattctctacctctaaccctattacaggggctgagtcactggcttactggtgctctttcatgccgtccctaggaggggtgcgtcacttgagtgggttgagtcactgatgtgatctttctgtctgggttggcgcccccccttgggttgtgccgtggcggagatctttgtgggctatacttggccttgtctcaggatggtaagttggtggttgaagatatccctgtgggggctgtgcttttgcaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1328168 True 342 lncRNA 0.55 1 31635518 31635859

Neighbor

gene id symbol gene type direction distance location
LOC110486123 LOC106607440 coding upstream 123789 31489817 ~ 31513332 (+)
LOC110486119 LOC106600898 coding upstream 193380 31409126 ~ 31442138 (+)
LOC110486114 NA coding upstream 365087 31267822 ~ 31270431 (+)
LOC110486110 LOC106607429 coding upstream 385436 31243865 ~ 31250082 (+)
LOC110486108 LOC106607428 coding upstream 392391 31240900 ~ 31243127 (+)
LOC110486128 LOC106607447 coding downstream 6523 31642382 ~ 31649841 (+)
LOC110486130 LOC106607449 coding downstream 30381 31666240 ~ 31673890 (+)
LOC110486131 LOC105029658 coding downstream 48615 31684474 ~ 31690205 (+)
LOC110487528 tex33 coding downstream 55674 31691533 ~ 31692268 (+)
il2rb2 il2rb2 coding downstream 66105 31701964 ~ 31709740 (+)
G1164604 NA non-coding upstream 12247 31622998 ~ 31623271 (+)
G1164591 NA non-coding upstream 42224 31592211 ~ 31593294 (+)
G1164583 NA non-coding upstream 51010 31583458 ~ 31584508 (+)
G1164582 NA non-coding upstream 52656 31582305 ~ 31582862 (+)
G1164572 NA non-coding upstream 60535 31574716 ~ 31574983 (+)
G1164618 NA non-coding downstream 18456 31654315 ~ 31654703 (+)
G1164620 NA non-coding downstream 81649 31717508 ~ 31807548 (+)
G1164619 NA non-coding downstream 82744 31718603 ~ 31810999 (+)
G1164622 LOC106600878 non-coding downstream 106867 31742726 ~ 31747322 (+)
G1164993 NA non-coding downstream 282889 31918748 ~ 31919040 (+)
LOC110486104 chchd5 other upstream 515841 31113781 ~ 31119681 (+)
G1162753 NA other upstream 1804222 29830754 ~ 29831296 (+)
G1162364 NA other upstream 2140616 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 2264571 29266618 ~ 29370947 (+)
G1161908 NA other upstream 2335862 29298758 ~ 29299656 (+)
LOC110486134 LOC106600876 other downstream 365892 32001741 ~ 32159164 (+)
ifn2 ifn2 other downstream 1079397 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 1593254 33001356 ~ 33230495 (+)
G1166318 NA other downstream 1604094 33239953 ~ 33249208 (+)
G1166779 NA other downstream 2154781 33790640 ~ 33803665 (+)

Expression


Co-expression Network