G1164618


Basic Information

Item Value
gene id G1164618
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 31654315 ~ 31654703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1328174
tgaatgagtaggtgttctaaaacttttgaccggtaatgTATGTAGAGACCAATAATGCTAGAGCCGATTATTGAGGCTTGTTCACTCGACTGAAAGATCTCTTTCATGCCCCTGTTAAGACAAGATATTAACTCGCATTAGACTAATGTTACCCATCATAATCTCAGTTTGAAAGACCAGCAATCTGAGAATGGAGCTAACAAAATATCTTTCAAATAGACCCCAATTTCCATTCCCACATAAATTATAATtaataaatataatatttttcaGACATCATTCATTCCAAATTGGTTACATAATATTACGGTAACATAATATTAGCCAATGAAGCAATTCCCAATTCAACAAACACTGAGCCCTAAACCAAGGGATATACTATGAAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1328174 True 389 lncRNA 0.34 1 31654315 31654703

Neighbor

gene id symbol gene type direction distance location
LOC110486128 LOC106607447 coding upstream 4474 31642382 ~ 31649841 (+)
LOC110486123 LOC106607440 coding upstream 142586 31489817 ~ 31513332 (+)
LOC110486119 LOC106600898 coding upstream 212177 31409126 ~ 31442138 (+)
LOC110486114 NA coding upstream 383884 31267822 ~ 31270431 (+)
LOC110486110 LOC106607429 coding upstream 404233 31243865 ~ 31250082 (+)
LOC110486130 LOC106607449 coding downstream 11537 31666240 ~ 31673890 (+)
LOC110486131 LOC105029658 coding downstream 29771 31684474 ~ 31690205 (+)
LOC110487528 tex33 coding downstream 36830 31691533 ~ 31692268 (+)
il2rb2 il2rb2 coding downstream 47261 31701964 ~ 31709740 (+)
LOC110486134 LOC106600876 coding downstream 347038 32001741 ~ 32159164 (+)
G1164612 NA non-coding upstream 18456 31635518 ~ 31635859 (+)
G1164604 NA non-coding upstream 31044 31622998 ~ 31623271 (+)
G1164591 NA non-coding upstream 61021 31592211 ~ 31593294 (+)
G1164583 NA non-coding upstream 69807 31583458 ~ 31584508 (+)
G1164582 NA non-coding upstream 71453 31582305 ~ 31582862 (+)
G1164620 NA non-coding downstream 62805 31717508 ~ 31807548 (+)
G1164619 NA non-coding downstream 63900 31718603 ~ 31810999 (+)
G1164622 LOC106600878 non-coding downstream 88023 31742726 ~ 31747322 (+)
G1164993 NA non-coding downstream 264045 31918748 ~ 31919040 (+)
G1165223 NA non-coding downstream 499248 32153951 ~ 32154176 (+)
LOC110486104 chchd5 other upstream 534638 31113781 ~ 31119681 (+)
G1162753 NA other upstream 1823019 29830754 ~ 29831296 (+)
G1162364 NA other upstream 2159413 29494362 ~ 29494902 (+)
si:ch211-126j24.1 LOC106585260 other upstream 2283368 29266618 ~ 29370947 (+)
G1161908 NA other upstream 2354659 29298758 ~ 29299656 (+)
ifn2 ifn2 other downstream 1060553 32714937 ~ 32722676 (+)
LOC110486146 LOC106607468 other downstream 1574410 33001356 ~ 33230495 (+)
G1166318 NA other downstream 1585250 33239953 ~ 33249208 (+)
G1166779 NA other downstream 2135937 33790640 ~ 33803665 (+)

Expression


Co-expression Network