G1165899


Basic Information

Item Value
gene id G1165899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 32814618 ~ 32814867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1329563
gtaacatcttatgtttcactgagtccaTGGCTGAATgacatgaataacacacagctggcgggttattcactgcatcggcaggatagaacagcggcctctggtaagacaaggggtgattGTCTAtctatatttgtaaacaacagctggtgcacgatatctaaagaagtctcaaggttttgctcacctgaggtagagtatctcatgataagctgtagaccacactatctacctagagagttttcatctgtat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1329563 True 250 lncRNA 0.43 1 32814618 32814867

Neighbor

gene id symbol gene type direction distance location
ifn2 ifn2 coding upstream 91942 32714937 ~ 32722676 (+)
LOC110487530 LOC106595256 coding upstream 247835 32552247 ~ 32566783 (+)
gh2 gh2 coding upstream 285767 32525237 ~ 32528851 (+)
LOC100136790 scn4aa coding upstream 308693 32462211 ~ 32505925 (+)
LOC118938068 NA coding downstream 5179 32820046 ~ 32824535 (+)
LOC110485150 LOC105907864 coding downstream 10355 32825222 ~ 32826023 (+)
LOC110486141 LOC106607465 coding downstream 11625 32826492 ~ 32843099 (+)
si:dkey-283b1.6 NA coding downstream 28429 32843296 ~ 32845896 (+)
LOC110486146 LOC106607468 coding downstream 186489 33001356 ~ 33230495 (+)
G1165893 NA non-coding upstream 10385 32803893 ~ 32804233 (+)
G1165885 NA non-coding upstream 26428 32787984 ~ 32788190 (+)
G1165840 NA non-coding upstream 100813 32713241 ~ 32713805 (+)
G1165817 NA non-coding upstream 140432 32665664 ~ 32674186 (+)
G1165814 NA non-coding upstream 141816 32657612 ~ 32672802 (+)
G1165902 NA non-coding downstream 4128 32818995 ~ 32819202 (+)
G1165913 NA non-coding downstream 38390 32853257 ~ 32853636 (+)
G1165914 NA non-coding downstream 39056 32853923 ~ 32858140 (+)
G1166077 NA non-coding downstream 90578 32905445 ~ 32905782 (+)
LOC110486134 LOC106600876 other upstream 703885 32001741 ~ 32159164 (+)
LOC110486104 chchd5 other upstream 1694941 31113781 ~ 31119681 (+)
G1162753 NA other upstream 2983322 29830754 ~ 29831296 (+)
G1162364 NA other upstream 3319716 29494362 ~ 29494902 (+)
G1166318 NA other downstream 425086 33239953 ~ 33249208 (+)
G1166779 NA other downstream 975773 33790640 ~ 33803665 (+)
LOC110486188 LOC107665142 other downstream 1866321 34680909 ~ 34687670 (+)
G1169121 LOC106607257 other downstream 3174989 35989856 ~ 35992600 (+)

Expression


Co-expression Network