Gene
RNA
| Item | Value |
|---|---|
| gene id | G1166202 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 33016492 ~ 33016714 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1329896 | True | 223 | lncRNA | 0.49 | 1 | 33016492 | 33016714 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-283b1.6 | NA | coding | upstream | 170596 | 32843296 ~ 32845896 (+) |
| LOC110486141 | LOC106607465 | coding | upstream | 173393 | 32826492 ~ 32843099 (+) |
| LOC110485150 | LOC105907864 | coding | upstream | 190469 | 32825222 ~ 32826023 (+) |
| LOC118938068 | NA | coding | upstream | 191957 | 32820046 ~ 32824535 (+) |
| ifn2 | ifn2 | coding | upstream | 293816 | 32714937 ~ 32722676 (+) |
| LOC110486149 | LOC106600856 | coding | downstream | 232518 | 33249232 ~ 33255122 (+) |
| LOC110486148 | LOC106607470 | coding | downstream | 254365 | 33271079 ~ 33284807 (+) |
| LOC110485152 | LOC106607471 | coding | downstream | 280044 | 33296758 ~ 33304976 (+) |
| LOC110486150 | psd3 | coding | downstream | 303921 | 33320635 ~ 33327034 (+) |
| csf-3 | csf-3 | coding | downstream | 318733 | 33335447 ~ 33339727 (+) |
| G1166201 | NA | non-coding | upstream | 244 | 33015980 ~ 33016248 (+) |
| G1166188 | NA | non-coding | upstream | 22755 | 32993534 ~ 32993737 (+) |
| G1166187 | NA | non-coding | upstream | 23185 | 32992948 ~ 32993307 (+) |
| G1166077 | NA | non-coding | upstream | 110710 | 32905445 ~ 32905782 (+) |
| G1165914 | NA | non-coding | upstream | 158352 | 32853923 ~ 32858140 (+) |
| G1166204 | NA | non-coding | downstream | 1266 | 33017980 ~ 33018199 (+) |
| G1166214 | NA | non-coding | downstream | 12877 | 33029591 ~ 33029920 (+) |
| G1166218 | NA | non-coding | downstream | 17212 | 33033926 ~ 33034166 (+) |
| G1166221 | NA | non-coding | downstream | 20341 | 33037055 ~ 33037280 (+) |
| G1166226 | NA | non-coding | downstream | 24324 | 33041038 ~ 33041274 (+) |
| LOC110486134 | LOC106600876 | other | upstream | 905759 | 32001741 ~ 32159164 (+) |
| LOC110486104 | chchd5 | other | upstream | 1896815 | 31113781 ~ 31119681 (+) |
| G1162753 | NA | other | upstream | 3185196 | 29830754 ~ 29831296 (+) |
| G1162364 | NA | other | upstream | 3521590 | 29494362 ~ 29494902 (+) |
| LOC110486146 | LOC106607468 | other | downstream | 212399 | 33001356 ~ 33230495 (+) |
| G1166318 | NA | other | downstream | 223239 | 33239953 ~ 33249208 (+) |
| G1166779 | NA | other | downstream | 773926 | 33790640 ~ 33803665 (+) |
| LOC110486188 | LOC107665142 | other | downstream | 1664474 | 34680909 ~ 34687670 (+) |
| G1169121 | LOC106607257 | other | downstream | 2973142 | 35989856 ~ 35992600 (+) |
