G1166226


Basic Information

Item Value
gene id G1166226
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 33041038 ~ 33041274 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1329920
ggtgcaccttgtgctggggacagtaacAGGCCACTCTAaagtgtgcagttttgtcacacaacgctgcagaagtctcaagttttgagggagtgtgcaattggcgtgctgactgcagtaatgtccaccagagctaaaaatggaatgttaatttctctaccataagccacctccaacctcatattagagaatttagcagtacgcccaaccggcctcacaaccgcagaccacgtgtaacta

Function

NR:

description
hypothetical protein EH28_06569

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1329920 True 237 lncRNA 0.48 1 33041038 33041274

Neighbor

gene id symbol gene type direction distance location
si:dkey-283b1.6 NA coding upstream 195142 32843296 ~ 32845896 (+)
LOC110486141 LOC106607465 coding upstream 197939 32826492 ~ 32843099 (+)
LOC110485150 LOC105907864 coding upstream 215015 32825222 ~ 32826023 (+)
LOC118938068 NA coding upstream 216503 32820046 ~ 32824535 (+)
ifn2 ifn2 coding upstream 318362 32714937 ~ 32722676 (+)
LOC110486149 LOC106600856 coding downstream 207958 33249232 ~ 33255122 (+)
LOC110486148 LOC106607470 coding downstream 229805 33271079 ~ 33284807 (+)
LOC110485152 LOC106607471 coding downstream 255484 33296758 ~ 33304976 (+)
LOC110486150 psd3 coding downstream 279361 33320635 ~ 33327034 (+)
csf-3 csf-3 coding downstream 294173 33335447 ~ 33339727 (+)
G1166221 NA non-coding upstream 3758 33037055 ~ 33037280 (+)
G1166218 NA non-coding upstream 6872 33033926 ~ 33034166 (+)
G1166214 NA non-coding upstream 11118 33029591 ~ 33029920 (+)
G1166204 NA non-coding upstream 22839 33017980 ~ 33018199 (+)
G1166202 NA non-coding upstream 24324 33016492 ~ 33016714 (+)
G1166228 NA non-coding downstream 2762 33044036 ~ 33044329 (+)
G1166229 NA non-coding downstream 6701 33047975 ~ 33048352 (+)
G1166230 NA non-coding downstream 32277 33073551 ~ 33074155 (+)
G1166231 NA non-coding downstream 33524 33074798 ~ 33075012 (+)
G1166232 NA non-coding downstream 34883 33076157 ~ 33076541 (+)
LOC110486134 LOC106600876 other upstream 930305 32001741 ~ 32159164 (+)
LOC110486104 chchd5 other upstream 1921361 31113781 ~ 31119681 (+)
G1162753 NA other upstream 3209742 29830754 ~ 29831296 (+)
G1162364 NA other upstream 3546136 29494362 ~ 29494902 (+)
LOC110486146 LOC106607468 other downstream 187839 33001356 ~ 33230495 (+)
G1166318 NA other downstream 198679 33239953 ~ 33249208 (+)
G1166779 NA other downstream 749366 33790640 ~ 33803665 (+)
LOC110486188 LOC107665142 other downstream 1639914 34680909 ~ 34687670 (+)
G1169121 LOC106607257 other downstream 2948582 35989856 ~ 35992600 (+)

Expression


Co-expression Network