Gene
RNA
| Item | Value |
|---|---|
| gene id | G1166230 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 33073551 ~ 33074155 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1329924 | True | 605 | lncRNA | 0.49 | 1 | 33073551 | 33074155 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-283b1.6 | NA | coding | upstream | 227655 | 32843296 ~ 32845896 (+) |
| LOC110486141 | LOC106607465 | coding | upstream | 230452 | 32826492 ~ 32843099 (+) |
| LOC110485150 | LOC105907864 | coding | upstream | 247528 | 32825222 ~ 32826023 (+) |
| LOC118938068 | NA | coding | upstream | 249016 | 32820046 ~ 32824535 (+) |
| ifn2 | ifn2 | coding | upstream | 350875 | 32714937 ~ 32722676 (+) |
| LOC110486149 | LOC106600856 | coding | downstream | 175077 | 33249232 ~ 33255122 (+) |
| LOC110486148 | LOC106607470 | coding | downstream | 196924 | 33271079 ~ 33284807 (+) |
| LOC110485152 | LOC106607471 | coding | downstream | 222603 | 33296758 ~ 33304976 (+) |
| LOC110486150 | psd3 | coding | downstream | 246480 | 33320635 ~ 33327034 (+) |
| csf-3 | csf-3 | coding | downstream | 261292 | 33335447 ~ 33339727 (+) |
| G1166229 | NA | non-coding | upstream | 25199 | 33047975 ~ 33048352 (+) |
| G1166228 | NA | non-coding | upstream | 29222 | 33044036 ~ 33044329 (+) |
| G1166226 | NA | non-coding | upstream | 32277 | 33041038 ~ 33041274 (+) |
| G1166221 | NA | non-coding | upstream | 36271 | 33037055 ~ 33037280 (+) |
| G1166218 | NA | non-coding | upstream | 39385 | 33033926 ~ 33034166 (+) |
| G1166231 | NA | non-coding | downstream | 643 | 33074798 ~ 33075012 (+) |
| G1166232 | NA | non-coding | downstream | 2002 | 33076157 ~ 33076541 (+) |
| G1166235 | NA | non-coding | downstream | 6752 | 33080907 ~ 33081245 (+) |
| G1166237 | NA | non-coding | downstream | 9416 | 33083571 ~ 33083793 (+) |
| G1166239 | NA | non-coding | downstream | 13360 | 33087515 ~ 33087846 (+) |
| LOC110486134 | LOC106600876 | other | upstream | 962818 | 32001741 ~ 32159164 (+) |
| LOC110486104 | chchd5 | other | upstream | 1953874 | 31113781 ~ 31119681 (+) |
| G1162753 | NA | other | upstream | 3242255 | 29830754 ~ 29831296 (+) |
| G1162364 | NA | other | upstream | 3578649 | 29494362 ~ 29494902 (+) |
| LOC110486146 | LOC106607468 | other | downstream | 154958 | 33001356 ~ 33230495 (+) |
| G1166318 | NA | other | downstream | 165798 | 33239953 ~ 33249208 (+) |
| G1166779 | NA | other | downstream | 716485 | 33790640 ~ 33803665 (+) |
| LOC110486188 | LOC107665142 | other | downstream | 1607033 | 34680909 ~ 34687670 (+) |
| G1169121 | LOC106607257 | other | downstream | 2915701 | 35989856 ~ 35992600 (+) |
