G1166231


Basic Information

Item Value
gene id G1166231
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 33074798 ~ 33075012 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1329925
ctccactcttctctctctctaaccctttccctccactcttctctctctctctaaccccttccctccactcttctctctctctctaaccccttccctccactcttctctctctctaaccctttccctccactcttctctctctctaaccctttccctccactcttctctctctctaaccctttccctccactcttctctctctctaaccctttccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1329925 True 215 lncRNA 0.51 1 33074798 33075012

Neighbor

gene id symbol gene type direction distance location
si:dkey-283b1.6 NA coding upstream 228902 32843296 ~ 32845896 (+)
LOC110486141 LOC106607465 coding upstream 231699 32826492 ~ 32843099 (+)
LOC110485150 LOC105907864 coding upstream 248775 32825222 ~ 32826023 (+)
LOC118938068 NA coding upstream 250263 32820046 ~ 32824535 (+)
ifn2 ifn2 coding upstream 352122 32714937 ~ 32722676 (+)
LOC110486149 LOC106600856 coding downstream 174220 33249232 ~ 33255122 (+)
LOC110486148 LOC106607470 coding downstream 196067 33271079 ~ 33284807 (+)
LOC110485152 LOC106607471 coding downstream 221746 33296758 ~ 33304976 (+)
LOC110486150 psd3 coding downstream 245623 33320635 ~ 33327034 (+)
csf-3 csf-3 coding downstream 260435 33335447 ~ 33339727 (+)
G1166230 NA non-coding upstream 643 33073551 ~ 33074155 (+)
G1166229 NA non-coding upstream 26446 33047975 ~ 33048352 (+)
G1166228 NA non-coding upstream 30469 33044036 ~ 33044329 (+)
G1166226 NA non-coding upstream 33524 33041038 ~ 33041274 (+)
G1166221 NA non-coding upstream 37518 33037055 ~ 33037280 (+)
G1166232 NA non-coding downstream 1145 33076157 ~ 33076541 (+)
G1166235 NA non-coding downstream 5895 33080907 ~ 33081245 (+)
G1166237 NA non-coding downstream 8559 33083571 ~ 33083793 (+)
G1166239 NA non-coding downstream 12503 33087515 ~ 33087846 (+)
G1166240 NA non-coding downstream 13571 33088583 ~ 33127393 (+)
LOC110486134 LOC106600876 other upstream 964065 32001741 ~ 32159164 (+)
LOC110486104 chchd5 other upstream 1955121 31113781 ~ 31119681 (+)
G1162753 NA other upstream 3243502 29830754 ~ 29831296 (+)
G1162364 NA other upstream 3579896 29494362 ~ 29494902 (+)
LOC110486146 LOC106607468 other downstream 154101 33001356 ~ 33230495 (+)
G1166318 NA other downstream 164941 33239953 ~ 33249208 (+)
G1166779 NA other downstream 715628 33790640 ~ 33803665 (+)
LOC110486188 LOC107665142 other downstream 1606176 34680909 ~ 34687670 (+)
G1169121 LOC106607257 other downstream 2914844 35989856 ~ 35992600 (+)

Expression


Co-expression Network