G1166357


Basic Information

Item Value
gene id G1166357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 33312887 ~ 33313192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1330079
gcagatgtatttctcacatgtgcagcacatagtatttgtttttacagtccttctttgggggacagaattggcatctcctcctcttgcctggcCCAGCTACAgtctcaggtggatcaggacaagattcagccccctgaacagctttcacaagtgctgcagaggctgctgtgcgtGGGAGGCGCTCCCTTCTTTCAATGTGTGGgtttacaagtgcctttcccagctgctccaggaacagcctcctcttgttccgcttatcaggcgtacaggtagggttgatcttgttccacaTGGGCCAGCGGGGAG

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1330079 True 306 lncRNA 0.53 1 33312887 33313192

Neighbor

gene id symbol gene type direction distance location
LOC110485152 LOC106607471 coding upstream 10461 33296758 ~ 33304976 (+)
LOC110486148 LOC106607470 coding upstream 28080 33271079 ~ 33284807 (+)
LOC110486149 LOC106600856 coding upstream 57765 33249232 ~ 33255122 (+)
LOC110486146 LOC106607468 coding upstream 82392 33001356 ~ 33230495 (+)
si:dkey-283b1.6 NA coding upstream 466991 32843296 ~ 32845896 (+)
LOC110486150 psd3 coding downstream 7443 33320635 ~ 33327034 (+)
csf-3 csf-3 coding downstream 22255 33335447 ~ 33339727 (+)
LOC110486158 LOC106607478 coding downstream 324617 33637809 ~ 33653835 (+)
LOC110486161 LOC106607482 coding downstream 457247 33770439 ~ 33783009 (+)
LOC110485153 LOC106607489 coding downstream 905653 34218845 ~ 34221786 (+)
G1166354 NA non-coding upstream 5064 33307519 ~ 33307823 (+)
G1166318 NA non-coding upstream 63679 33239953 ~ 33249208 (+)
G1166240 NA non-coding upstream 185494 33088583 ~ 33127393 (+)
G1166242 NA non-coding upstream 214394 33097845 ~ 33098493 (+)
G1166364 NA non-coding downstream 6007 33319199 ~ 33319408 (+)
G1166369 NA non-coding downstream 19217 33332409 ~ 33332663 (+)
G1166571 NA non-coding downstream 32769 33345961 ~ 33346185 (+)
G1166573 LOC106607474 non-coding downstream 35628 33348820 ~ 33366167 (+)
G1166582 NA non-coding downstream 54452 33367644 ~ 33367905 (+)
ifn2 ifn2 other upstream 590425 32714937 ~ 32722676 (+)
LOC110486134 LOC106600876 other upstream 1202154 32001741 ~ 32159164 (+)
LOC110486104 chchd5 other upstream 2193210 31113781 ~ 31119681 (+)
G1166779 NA other downstream 477448 33790640 ~ 33803665 (+)
LOC110486188 LOC107665142 other downstream 1367996 34680909 ~ 34687670 (+)
G1169121 LOC106607257 other downstream 2676664 35989856 ~ 35992600 (+)
G1169207 NA other downstream 2854436 36167628 ~ 36168331 (+)
G1169208 NA other downstream 2856704 36169896 ~ 36171571 (+)

Expression


Co-expression Network