Gene
RNA
| Item | Value |
|---|---|
| gene id | G1167471 |
| gene name | LOC106607488 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 34181488 ~ 34182131 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| homeobox protein Hox-B10a-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1331338 | True | 644 | lncRNA | 0.55 | 1 | 34181488 | 34182131 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486161 | LOC106607482 | coding | upstream | 398479 | 33770439 ~ 33783009 (+) |
| LOC110486158 | LOC106607478 | coding | upstream | 527653 | 33637809 ~ 33653835 (+) |
| csf-3 | csf-3 | coding | upstream | 841761 | 33335447 ~ 33339727 (+) |
| LOC110486150 | psd3 | coding | upstream | 854454 | 33320635 ~ 33327034 (+) |
| LOC110485152 | LOC106607471 | coding | upstream | 879062 | 33296758 ~ 33304976 (+) |
| LOC110485153 | LOC106607489 | coding | downstream | 36714 | 34218845 ~ 34221786 (+) |
| LOC110486176 | LOC106607492 | coding | downstream | 83253 | 34265384 ~ 34272808 (+) |
| LOC110486177 | LOC106607493 | coding | downstream | 95105 | 34277236 ~ 34292574 (+) |
| LOC110486178 | LOC106607494 | coding | downstream | 127323 | 34309454 ~ 34366289 (+) |
| LOC110486179 | LOC106607495 | coding | downstream | 185166 | 34367297 ~ 34372229 (+) |
| G1167469 | LOC106607488 | non-coding | upstream | 1383 | 34179535 ~ 34180105 (+) |
| G1167465 | hoxb9ab | non-coding | upstream | 13550 | 34165433 ~ 34167938 (+) |
| G1167464 | NA | non-coding | upstream | 16552 | 34164683 ~ 34164936 (+) |
| G1167428 | NA | non-coding | upstream | 32710 | 34148153 ~ 34148778 (+) |
| G1167420 | NA | non-coding | upstream | 48627 | 34132513 ~ 34132861 (+) |
| G1167506 | NA | non-coding | downstream | 40858 | 34222989 ~ 34223454 (+) |
| G1167507 | NA | non-coding | downstream | 41441 | 34223572 ~ 34223775 (+) |
| G1167508 | NA | non-coding | downstream | 41982 | 34224113 ~ 34224579 (+) |
| G1167558 | NA | non-coding | downstream | 46429 | 34228560 ~ 34228789 (+) |
| G1166779 | NA | other | upstream | 377823 | 33790640 ~ 33803665 (+) |
| G1166318 | NA | other | upstream | 932280 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 951005 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 1459026 | 32714937 ~ 32722676 (+) |
| LOC110486134 | LOC106600876 | other | upstream | 2070755 | 32001741 ~ 32159164 (+) |
| LOC110486188 | LOC107665142 | other | downstream | 499057 | 34680909 ~ 34687670 (+) |
| G1169121 | LOC106607257 | other | downstream | 1807725 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 1985497 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 1987765 | 36169896 ~ 36171571 (+) |
| LOC110486232 | rprml | other | downstream | 2155962 | 36338066 ~ 36339755 (+) |
