G1167508


Basic Information

Item Value
gene id G1167508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 34224113 ~ 34224579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1331375
ATGGGGAACGCCACTATGTGATATTTACAACATCCTGCTGCTGGACATGCTAACGACATGCTAACGTagcctctgtctctttttcttgtCTTAATGGCATCAACAGTCACAATGCTCTGCAACCAGACTGCTTTCTATACCTTTACTTTCAACATGCAGCCTAATAGTAAGAGATTGTTTAAGGTCTGGATTGGTTCACAGCCAAGGCCTTGAAATGGCATCAAGTTAATACGGTATACAATGTAAACCAACAGCCAAATTAAGAATTTATAAGTACTTTCAAATATACTTAATACTGTAAATATGACATTAATGACAACTATGTGACTTGACAAGAGATATATTCACAAAAAGCTGCTGAGGTTCTGGATTGTGTTCAACAACTAACAATAACTACGTTCAATGTAATGTATCCAAATGGAGGCCTACCTTTTTTACTTTCAGTAACCAAAtctctctctttaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1331375 True 467 lncRNA 0.36 1 34224113 34224579

Neighbor

gene id symbol gene type direction distance location
LOC110485153 LOC106607489 coding upstream 2327 34218845 ~ 34221786 (+)
LOC110486161 LOC106607482 coding upstream 441104 33770439 ~ 33783009 (+)
LOC110486158 LOC106607478 coding upstream 570278 33637809 ~ 33653835 (+)
csf-3 csf-3 coding upstream 884386 33335447 ~ 33339727 (+)
LOC110486150 psd3 coding upstream 897079 33320635 ~ 33327034 (+)
LOC110486176 LOC106607492 coding downstream 40805 34265384 ~ 34272808 (+)
LOC110486177 LOC106607493 coding downstream 52657 34277236 ~ 34292574 (+)
LOC110486178 LOC106607494 coding downstream 84875 34309454 ~ 34366289 (+)
LOC110486179 LOC106607495 coding downstream 142718 34367297 ~ 34372229 (+)
LOC110486182 LOC106607497 coding downstream 198854 34423433 ~ 34429172 (+)
G1167507 NA non-coding upstream 338 34223572 ~ 34223775 (+)
G1167506 NA non-coding upstream 659 34222989 ~ 34223454 (+)
G1167471 LOC106607488 non-coding upstream 41982 34181488 ~ 34182131 (+)
G1167469 LOC106607488 non-coding upstream 44008 34179535 ~ 34180105 (+)
G1167558 NA non-coding downstream 3981 34228560 ~ 34228789 (+)
G1167585 NA non-coding downstream 26873 34251452 ~ 34251713 (+)
G1167609 NA non-coding downstream 50155 34274734 ~ 34274961 (+)
G1167622 NA non-coding downstream 77243 34301822 ~ 34302111 (+)
G1166779 NA other upstream 420448 33790640 ~ 33803665 (+)
G1166318 NA other upstream 974905 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 993630 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 1501651 32714937 ~ 32722676 (+)
LOC110486134 LOC106600876 other upstream 2113380 32001741 ~ 32159164 (+)
LOC110486188 LOC107665142 other downstream 456609 34680909 ~ 34687670 (+)
G1169121 LOC106607257 other downstream 1765277 35989856 ~ 35992600 (+)
G1169207 NA other downstream 1943049 36167628 ~ 36168331 (+)
G1169208 NA other downstream 1945317 36169896 ~ 36171571 (+)
LOC110486232 rprml other downstream 2113514 36338066 ~ 36339755 (+)

Expression


Co-expression Network