Gene
RNA
| Item | Value |
|---|---|
| gene id | G1167652 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 34377398 ~ 34377621 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1331536 | True | 224 | lncRNA | 0.42 | 1 | 34377398 | 34377621 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486179 | LOC106607495 | coding | upstream | 5169 | 34367297 ~ 34372229 (+) |
| LOC110486178 | LOC106607494 | coding | upstream | 11109 | 34309454 ~ 34366289 (+) |
| LOC110486177 | LOC106607493 | coding | upstream | 84824 | 34277236 ~ 34292574 (+) |
| LOC110486176 | LOC106607492 | coding | upstream | 104590 | 34265384 ~ 34272808 (+) |
| LOC110485153 | LOC106607489 | coding | upstream | 155612 | 34218845 ~ 34221786 (+) |
| LOC110486182 | LOC106607497 | coding | downstream | 45812 | 34423433 ~ 34429172 (+) |
| LOC110486181 | LOC106607498 | coding | downstream | 51712 | 34429333 ~ 34443615 (+) |
| LOC110486183 | LOC106607499 | coding | downstream | 80487 | 34458108 ~ 34491094 (+) |
| LOC110486187 | LOC106600778 | coding | downstream | 266129 | 34643750 ~ 34678134 (+) |
| LOC110486188 | LOC107665142 | coding | downstream | 303288 | 34680909 ~ 34687670 (+) |
| G1167648 | NA | non-coding | upstream | 3531 | 34373324 ~ 34373867 (+) |
| G1167647 | NA | non-coding | upstream | 4170 | 34372893 ~ 34373228 (+) |
| G1167622 | NA | non-coding | upstream | 75287 | 34301822 ~ 34302111 (+) |
| G1167609 | NA | non-coding | upstream | 102437 | 34274734 ~ 34274961 (+) |
| G1167653 | NA | non-coding | downstream | 238 | 34377859 ~ 34378116 (+) |
| G1167656 | NA | non-coding | downstream | 6393 | 34384014 ~ 34384310 (+) |
| G1167662 | NA | non-coding | downstream | 13112 | 34390733 ~ 34391000 (+) |
| G1167692 | NA | non-coding | downstream | 114824 | 34492445 ~ 34492806 (+) |
| G1167694 | NA | non-coding | downstream | 123085 | 34500706 ~ 34500929 (+) |
| G1166779 | NA | other | upstream | 573733 | 33790640 ~ 33803665 (+) |
| G1166318 | NA | other | upstream | 1128190 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 1146915 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 1654936 | 32714937 ~ 32722676 (+) |
| LOC110486134 | LOC106600876 | other | upstream | 2266665 | 32001741 ~ 32159164 (+) |
| G1169121 | LOC106607257 | other | downstream | 1612235 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 1790007 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 1792275 | 36169896 ~ 36171571 (+) |
| LOC110486232 | rprml | other | downstream | 1960472 | 36338066 ~ 36339755 (+) |
