G1167656


Basic Information

Item Value
gene id G1167656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 34384014 ~ 34384310 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1331540
ccgccattgataaaagacagtactgtgcagccgttttcatcgacctggccaaggctttcgacactgtcaatcaccgtattcttatcggcagactcagtagccttggtttctcaaatgaatgcctcgcttggttcaccaactacttcgcagacagagttcagtgtgtaaaatcggagggcctgttgtccggacctctggcagtctctatgggggtaccacagggttcaattctcgggccgactcttttctctgtatatatcaacgatgtcgctcttgctgcgggtgattccctgatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1331540 True 297 lncRNA 0.51 1 34384014 34384310

Neighbor

gene id symbol gene type direction distance location
LOC110486179 LOC106607495 coding upstream 11785 34367297 ~ 34372229 (+)
LOC110486178 LOC106607494 coding upstream 17725 34309454 ~ 34366289 (+)
LOC110486177 LOC106607493 coding upstream 91440 34277236 ~ 34292574 (+)
LOC110486176 LOC106607492 coding upstream 111206 34265384 ~ 34272808 (+)
LOC110485153 LOC106607489 coding upstream 162228 34218845 ~ 34221786 (+)
LOC110486182 LOC106607497 coding downstream 39123 34423433 ~ 34429172 (+)
LOC110486181 LOC106607498 coding downstream 45023 34429333 ~ 34443615 (+)
LOC110486183 LOC106607499 coding downstream 73798 34458108 ~ 34491094 (+)
LOC110486187 LOC106600778 coding downstream 259440 34643750 ~ 34678134 (+)
LOC110486188 LOC107665142 coding downstream 296599 34680909 ~ 34687670 (+)
G1167653 NA non-coding upstream 5898 34377859 ~ 34378116 (+)
G1167652 NA non-coding upstream 6393 34377398 ~ 34377621 (+)
G1167648 NA non-coding upstream 10147 34373324 ~ 34373867 (+)
G1167647 NA non-coding upstream 10786 34372893 ~ 34373228 (+)
G1167662 NA non-coding downstream 6423 34390733 ~ 34391000 (+)
G1167692 NA non-coding downstream 108135 34492445 ~ 34492806 (+)
G1167694 NA non-coding downstream 116396 34500706 ~ 34500929 (+)
G1167695 NA non-coding downstream 117290 34501600 ~ 34501823 (+)
G1167671 NA non-coding downstream 118201 34502511 ~ 34505076 (+)
G1166779 NA other upstream 580349 33790640 ~ 33803665 (+)
G1166318 NA other upstream 1134806 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 1153531 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 1661552 32714937 ~ 32722676 (+)
LOC110486134 LOC106600876 other upstream 2273281 32001741 ~ 32159164 (+)
G1169121 LOC106607257 other downstream 1605546 35989856 ~ 35992600 (+)
G1169207 NA other downstream 1783318 36167628 ~ 36168331 (+)
G1169208 NA other downstream 1785586 36169896 ~ 36171571 (+)
LOC110486232 rprml other downstream 1953783 36338066 ~ 36339755 (+)

Expression


Co-expression Network