G1167807


Basic Information

Item Value
gene id G1167807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 34652483 ~ 34684628 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1331713
aaaacgttatgtttggcgtaaaagcaacacagctcatcaccatgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgctattcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaacatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcaagaatc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1331713 True 350 lncRNA 0.43 2 34652483 34684628

Neighbor

gene id symbol gene type direction distance location
LOC110486183 LOC106607499 coding upstream 161389 34458108 ~ 34491094 (+)
LOC110486181 LOC106607498 coding upstream 208868 34429333 ~ 34443615 (+)
LOC110486182 LOC106607497 coding upstream 223311 34423433 ~ 34429172 (+)
LOC110486179 LOC106607495 coding upstream 280254 34367297 ~ 34372229 (+)
LOC110486178 LOC106607494 coding upstream 286194 34309454 ~ 34366289 (+)
LOC110485154 LOC106600810 coding downstream 86377 34771005 ~ 34775251 (+)
LOC100136181 LOC100136181 coding downstream 98150 34782778 ~ 34844267 (+)
LOC110486194 LOC106607505 coding downstream 210143 34894771 ~ 34906048 (+)
LOC110486195 utp18 coding downstream 234703 34919331 ~ 34932630 (+)
LOC110485155 LOC106600806 coding downstream 252937 34937565 ~ 34947362 (+)
G1167715 eif1b non-coding upstream 7657 34641785 ~ 34644826 (+)
G1167712 NA non-coding upstream 115890 34535322 ~ 34536593 (+)
G1167670 NA non-coding upstream 126154 34522215 ~ 34526329 (+)
G1167674 LOC106600820 non-coding upstream 131556 34519314 ~ 34520927 (+)
G1167667 NA non-coding upstream 135925 34515759 ~ 34516558 (+)
G1167831 NA non-coding downstream 14348 34698976 ~ 34699211 (+)
G1167931 NA non-coding downstream 168142 34852770 ~ 34852974 (+)
G1167933 NA non-coding downstream 170067 34854695 ~ 34854931 (+)
G1167741 NA non-coding downstream 177516 34862144 ~ 34863493 (+)
G1167934 NA non-coding downstream 187194 34871822 ~ 34872185 (+)
G1166779 NA other upstream 848818 33790640 ~ 33803665 (+)
G1166318 NA other upstream 1403275 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 1422000 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 1930021 32714937 ~ 32722676 (+)
LOC110486134 LOC106600876 other upstream 2541750 32001741 ~ 32159164 (+)
G1169121 LOC106607257 other downstream 1305228 35989856 ~ 35992600 (+)
G1169207 NA other downstream 1483000 36167628 ~ 36168331 (+)
G1169208 NA other downstream 1485268 36169896 ~ 36171571 (+)
LOC110486232 rprml other downstream 1653465 36338066 ~ 36339755 (+)
LOC110486241 LOC106607273 other downstream 1866393 36551021 ~ 36582092 (+)

Expression


Co-expression Network