Gene
RNA
| Item | Value |
|---|---|
| gene id | G1167933 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 34854695 ~ 34854931 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1331846 | True | 237 | lncRNA | 0.45 | 1 | 34854695 | 34854931 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136181 | LOC100136181 | coding | upstream | 10428 | 34782778 ~ 34844267 (+) |
| LOC110485154 | LOC106600810 | coding | upstream | 79444 | 34771005 ~ 34775251 (+) |
| LOC110486188 | LOC107665142 | coding | upstream | 167025 | 34680909 ~ 34687670 (+) |
| LOC110486187 | LOC106600778 | coding | upstream | 176561 | 34643750 ~ 34678134 (+) |
| LOC110486183 | LOC106607499 | coding | upstream | 363601 | 34458108 ~ 34491094 (+) |
| LOC110486194 | LOC106607505 | coding | downstream | 39840 | 34894771 ~ 34906048 (+) |
| LOC110486195 | utp18 | coding | downstream | 64400 | 34919331 ~ 34932630 (+) |
| LOC110485155 | LOC106600806 | coding | downstream | 82634 | 34937565 ~ 34947362 (+) |
| LOC110486197 | LOC106607508 | coding | downstream | 120184 | 34975115 ~ 34998416 (+) |
| LOC110486198 | LOC106607509 | coding | downstream | 147574 | 35002505 ~ 35023019 (+) |
| G1167931 | NA | non-coding | upstream | 1721 | 34852770 ~ 34852974 (+) |
| G1167831 | NA | non-coding | upstream | 155484 | 34698976 ~ 34699211 (+) |
| G1167807 | NA | non-coding | upstream | 170067 | 34652483 ~ 34684628 (+) |
| G1167777 | NA | non-coding | upstream | 193722 | 34609617 ~ 34660973 (+) |
| G1167715 | eif1b | non-coding | upstream | 209869 | 34641785 ~ 34644826 (+) |
| G1167741 | NA | non-coding | downstream | 7213 | 34862144 ~ 34863493 (+) |
| G1167934 | NA | non-coding | downstream | 16891 | 34871822 ~ 34872185 (+) |
| G1167936 | NA | non-coding | downstream | 19453 | 34874384 ~ 34874615 (+) |
| G1167958 | NA | non-coding | downstream | 78307 | 34933238 ~ 34933462 (+) |
| G1167960 | LOC106584099 | non-coding | downstream | 79741 | 34934672 ~ 34934886 (+) |
| G1166779 | NA | other | upstream | 1051030 | 33790640 ~ 33803665 (+) |
| G1166318 | NA | other | upstream | 1605487 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 1624212 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 2132233 | 32714937 ~ 32722676 (+) |
| G1169121 | LOC106607257 | other | downstream | 1134925 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 1312697 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 1314965 | 36169896 ~ 36171571 (+) |
| LOC110486232 | rprml | other | downstream | 1483162 | 36338066 ~ 36339755 (+) |
| LOC110486241 | LOC106607273 | other | downstream | 1696090 | 36551021 ~ 36582092 (+) |
