Gene
RNA
| Item | Value |
|---|---|
| gene id | G1167936 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 34874384 ~ 34874615 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1331849 | True | 232 | lncRNA | 0.50 | 1 | 34874384 | 34874615 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136181 | LOC100136181 | coding | upstream | 30117 | 34782778 ~ 34844267 (+) |
| LOC110485154 | LOC106600810 | coding | upstream | 99133 | 34771005 ~ 34775251 (+) |
| LOC110486188 | LOC107665142 | coding | upstream | 186714 | 34680909 ~ 34687670 (+) |
| LOC110486187 | LOC106600778 | coding | upstream | 196250 | 34643750 ~ 34678134 (+) |
| LOC110486183 | LOC106607499 | coding | upstream | 383290 | 34458108 ~ 34491094 (+) |
| LOC110486194 | LOC106607505 | coding | downstream | 20156 | 34894771 ~ 34906048 (+) |
| LOC110486195 | utp18 | coding | downstream | 44716 | 34919331 ~ 34932630 (+) |
| LOC110485155 | LOC106600806 | coding | downstream | 62950 | 34937565 ~ 34947362 (+) |
| LOC110486197 | LOC106607508 | coding | downstream | 100500 | 34975115 ~ 34998416 (+) |
| LOC110486198 | LOC106607509 | coding | downstream | 127890 | 35002505 ~ 35023019 (+) |
| G1167934 | NA | non-coding | upstream | 2199 | 34871822 ~ 34872185 (+) |
| G1167741 | NA | non-coding | upstream | 10891 | 34862144 ~ 34863493 (+) |
| G1167933 | NA | non-coding | upstream | 19453 | 34854695 ~ 34854931 (+) |
| G1167931 | NA | non-coding | upstream | 21410 | 34852770 ~ 34852974 (+) |
| G1167831 | NA | non-coding | upstream | 175173 | 34698976 ~ 34699211 (+) |
| G1167958 | NA | non-coding | downstream | 58623 | 34933238 ~ 34933462 (+) |
| G1167960 | LOC106584099 | non-coding | downstream | 60057 | 34934672 ~ 34934886 (+) |
| G1167961 | NA | non-coding | downstream | 61055 | 34935670 ~ 34935918 (+) |
| G1167969 | NA | non-coding | downstream | 75726 | 34950341 ~ 34951244 (+) |
| G1167972 | NA | non-coding | downstream | 97684 | 34972299 ~ 34972534 (+) |
| G1166779 | NA | other | upstream | 1070719 | 33790640 ~ 33803665 (+) |
| G1166318 | NA | other | upstream | 1625176 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 1643901 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 2151922 | 32714937 ~ 32722676 (+) |
| G1169121 | LOC106607257 | other | downstream | 1115241 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 1293013 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 1295281 | 36169896 ~ 36171571 (+) |
| LOC110486232 | rprml | other | downstream | 1463478 | 36338066 ~ 36339755 (+) |
| LOC110486241 | LOC106607273 | other | downstream | 1676406 | 36551021 ~ 36582092 (+) |
