G1167972


Basic Information

Item Value
gene id G1167972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 34972299 ~ 34972534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1331886
gctttgttgcgaaacagaaagccgattctagattaaaaaaaaaaaataccttgagtgtggctgaggtgcacccgtgaccagctcggaaaccggattgcacagcggagaaggtacggtgggattcgaaatggtcagtgatctgtttattaacttggctttcaaatactttagaaaggcagggcaggatagatataggtctgtaacagcttgggtctagagtgtcacccccttggaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1331886 True 236 lncRNA 0.46 1 34972299 34972534

Neighbor

gene id symbol gene type direction distance location
LOC110485155 LOC106600806 coding upstream 24937 34937565 ~ 34947362 (+)
LOC110486195 utp18 coding upstream 39669 34919331 ~ 34932630 (+)
LOC110486194 LOC106607505 coding upstream 66251 34894771 ~ 34906048 (+)
LOC100136181 LOC100136181 coding upstream 128032 34782778 ~ 34844267 (+)
LOC110485154 LOC106600810 coding upstream 197048 34771005 ~ 34775251 (+)
LOC110486197 LOC106607508 coding downstream 2581 34975115 ~ 34998416 (+)
LOC110486198 LOC106607509 coding downstream 29971 35002505 ~ 35023019 (+)
LOC118938633 NA coding downstream 45542 35018076 ~ 35018219 (+)
LOC118938634 NA coding downstream 46411 35018945 ~ 35019088 (+)
LOC118938632 NA coding downstream 47015 35019549 ~ 35019692 (+)
G1167969 NA non-coding upstream 21055 34950341 ~ 34951244 (+)
G1167961 NA non-coding upstream 36381 34935670 ~ 34935918 (+)
G1167960 LOC106584099 non-coding upstream 37413 34934672 ~ 34934886 (+)
G1167958 NA non-coding upstream 38837 34933238 ~ 34933462 (+)
G1167936 NA non-coding upstream 97684 34874384 ~ 34874615 (+)
G1167984 NA non-coding downstream 27202 34999736 ~ 34999946 (+)
G1168035 NA non-coding downstream 150892 35123426 ~ 35124568 (+)
G1168013 NA non-coding downstream 152091 35124625 ~ 35125327 (+)
G1168133 NA non-coding downstream 311491 35284025 ~ 35292246 (+)
G1168134 NA non-coding downstream 312237 35284771 ~ 35293174 (+)
LOC110486188 LOC107665142 other upstream 284649 34680909 ~ 34687670 (+)
G1166779 NA other upstream 1168634 33790640 ~ 33803665 (+)
G1166318 NA other upstream 1723091 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 1741816 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 2249837 32714937 ~ 32722676 (+)
G1169121 LOC106607257 other downstream 1017322 35989856 ~ 35992600 (+)
G1169207 NA other downstream 1195094 36167628 ~ 36168331 (+)
G1169208 NA other downstream 1197362 36169896 ~ 36171571 (+)
LOC110486232 rprml other downstream 1365559 36338066 ~ 36339755 (+)
LOC110486241 LOC106607273 other downstream 1578487 36551021 ~ 36582092 (+)

Expression


Co-expression Network