G1168791


Basic Information

Item Value
gene id G1168791
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 35332112 ~ 35332965 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1332864
cctggaacccgaAAGCATTGTTCGACATGTTCCTTCACGGATTATCGGAGGTGATCAAAGATGAGCTCGCAGCCCTGGGAGCTGCCCATAGAAcgagtgtcagggaaccacagcgaaACAATCCAATCTATGCTGATTAAGTCACCTcaggttcccgtggtattgggattctcttggctccagcgacacaatcccatCATAGACTGGACTGTTGGTGCCATTATGGGCTGGACCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1332864 True 235 lncRNA 0.52 2 35332112 35332965

Neighbor

gene id symbol gene type direction distance location
LOC110486205 LOC106607518 coding upstream 94678 35197261 ~ 35237434 (+)
LOC110486200 LOC106607513 coding upstream 258179 35040535 ~ 35073933 (+)
LOC100499595 socs7 coding upstream 292643 35025113 ~ 35039469 (+)
LOC118938632 NA coding upstream 312420 35019549 ~ 35019692 (+)
LOC118938634 NA coding upstream 313024 35018945 ~ 35019088 (+)
LOC110486207 LOC106600795 coding downstream 154960 35487925 ~ 35497727 (+)
LOC110486213 hexim coding downstream 288412 35621377 ~ 35623321 (+)
trnac-gca-8 NA coding downstream 474202 35807167 ~ 35807238 (+)
trnac-gca-9 NA coding downstream 479189 35812154 ~ 35812225 (+)
LOC110486219 rl19 coding downstream 529128 35862093 ~ 35864645 (+)
G1168779 NA non-coding upstream 6963 35324243 ~ 35325149 (+)
G1168777 NA non-coding upstream 8916 35322994 ~ 35323196 (+)
G1168755 NA non-coding upstream 30297 35301592 ~ 35301815 (+)
G1168134 NA non-coding upstream 38938 35284771 ~ 35293174 (+)
G1168133 NA non-coding upstream 39866 35284025 ~ 35292246 (+)
G1168792 NA non-coding downstream 2724 35335689 ~ 35335923 (+)
G1168813 NA non-coding downstream 18664 35351629 ~ 35355873 (+)
G1168816 NA non-coding downstream 23797 35356762 ~ 35363514 (+)
G1168818 NA non-coding downstream 28690 35361655 ~ 35394001 (+)
G1168817 NA non-coding downstream 32551 35365516 ~ 35404023 (+)
LOC110486188 LOC107665142 other upstream 644462 34680909 ~ 34687670 (+)
G1166779 NA other upstream 1528447 33790640 ~ 33803665 (+)
G1166318 NA other upstream 2082904 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 2101629 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 2609650 32714937 ~ 32722676 (+)
G1169121 LOC106607257 other downstream 656891 35989856 ~ 35992600 (+)
G1169207 NA other downstream 834663 36167628 ~ 36168331 (+)
G1169208 NA other downstream 836931 36169896 ~ 36171571 (+)
LOC110486232 rprml other downstream 1005128 36338066 ~ 36339755 (+)
LOC110486241 LOC106607273 other downstream 1218056 36551021 ~ 36582092 (+)

Expression


Co-expression Network