G1168835


Basic Information

Item Value
gene id G1168835
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 35393076 ~ 35480915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1332928
aataaaaagcacttactgcaggcgaaaccagtcaatgctttggttagggttgctgttgtgacatgtagagactcaataaaaagtaggtgctgtaattcaatagagaatctattcattctgtatgaaaaaagagtgcatgattagctagaaacagcacataacacataaaataagtttatgtagtctttcttggtactcaagagcagagcctactggcaaaacacagttatggctaccccaaagagaagcacttattcttccagcaaaaaaatgtatgcttccatttaaggtaactttaatgtgaaactgggagaaaaaccatgttcagaaaagcaccacagaatgcttgttttcaaatggccatgaacaaataccccaataaaaagcacttactgcagaacaaaccagtcaatgcttttgttggggtttctgttgtgacatgtaggtagatgtagagactcgttaaaaagtggttgctgtaattcaatgcaaaatcagacctcaacttaatagcactttctgtggcttgataaaagaagggtgctcaagttgaagtagaattcagcatgttctggaaagctgagagctatggaaatgacctataactaacagagttaagactaccccaaagagaagcacttatgagctatggcctcaaataacgcttttctttgaattaatctttctattggcaaaagaggataacactgactatccagtgattttttgttgcataagtcacgtcaaactacaccaacaagtagcacttactgcattatatagacaagtcaatgctattgttagggtaccaattgtgacaggttcggtagggaaaaggccagagttggagatctctggtaaggactacttactgttttggtagagaaaaggccacagtcgtagagctctggtaaagacgacttcctgctaactccatgatttccatcttgtctggagcctatTCATGTAGGTGGTAGTCCTCCAAGGAGTCTCATTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1332928 True 1000 lncRNA 0.39 2 35393076 35480915
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110486204 LOC106607517 coding downstream 210314 35170206 ~ 35182762 (-)
LOC110486203 LOC106607515 coding downstream 244740 35123432 ~ 35148336 (-)
LOC110486202 LOC106600799 coding downstream 285446 35076805 ~ 35107630 (-)
LOC110486196 ubc12 coding downstream 426180 34955716 ~ 34966896 (-)
ndkb ndkb coding downstream 482291 34907936 ~ 34910785 (-)
trnac-gca-7 NA coding upstream 2069 35482984 ~ 35483055 (-)
LOC110486206 LOC106607239 coding upstream 16634 35497549 ~ 35532036 (-)
LOC110485156 LOC105007255 coding upstream 53521 35534436 ~ 35536497 (-)
LOC110486209 LOC100196171 coding upstream 56359 35537274 ~ 35547651 (-)
LOC110486210 LOC106600792 coding upstream 70096 35551011 ~ 35556137 (-)
G1168828 NA non-coding downstream 23138 35355517 ~ 35369938 (-)
G1168830 NA non-coding downstream 24436 35359652 ~ 35368640 (-)
G1168801 NA non-coding downstream 50317 35342537 ~ 35342759 (-)
G1168760 NA non-coding downstream 84941 35307914 ~ 35308135 (-)
G1168758 NA non-coding downstream 89549 35303291 ~ 35303527 (-)
G1170534 NA non-coding upstream 43692 35524607 ~ 35525082 (-)
G1170535 NA non-coding upstream 45363 35526278 ~ 35526661 (-)
G1170546 NA non-coding upstream 83595 35564510 ~ 35572006 (-)
LOC110486211 LOC106607244 non-coding upstream 102691 35583606 ~ 35680880 (-)
G1170611 NA non-coding upstream 202060 35682975 ~ 35683256 (-)
G1168629 NA other downstream 282065 35097452 ~ 35111011 (-)
G1168539 LOC106600802 other downstream 384779 35002513 ~ 35008297 (-)
G1168559 NA other downstream 442767 34949237 ~ 34950309 (-)
si:dkey-89b17.4 LOC106607502 other downstream 527680 34855625 ~ 34879901 (-)
G1170691 rl19 other upstream 381237 35862152 ~ 35864644 (-)
LOC110485158 LOC106607258 other upstream 518008 35995257 ~ 36000992 (-)
G1170811 NA other upstream 609847 36090762 ~ 36091417 (-)
G1170826 NA other upstream 629187 36110102 ~ 36110439 (-)
G1170998 NA other upstream 1012174 36493089 ~ 36493524 (-)

Expression

G1168835 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G1168835 Expression in each Bioproject

Bar chart with 3 bars.
G1168835 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
End of interactive chart.

Co-expression Network