Gene
RNA
| Item | Value |
|---|---|
| gene id | G1170618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 35691233 ~ 35691445 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1334971 | True | 213 | lncRNA | 0.54 | 1 | 35691233 | 35691445 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486211 | LOC106607244 | coding | downstream | 73995 | 35583606 ~ 35680880 (-) |
| LOC110486212 | LOC106607243 | coding | downstream | 108810 | 35565730 ~ 35582423 (-) |
| LOC110486210 | LOC106600792 | coding | downstream | 135096 | 35551011 ~ 35556137 (-) |
| LOC110486209 | LOC100196171 | coding | downstream | 143582 | 35537274 ~ 35547651 (-) |
| LOC110485156 | LOC105007255 | coding | downstream | 154736 | 35534436 ~ 35536497 (-) |
| lasp1 | LOC106607249 | coding | upstream | 54259 | 35745704 ~ 35787458 (-) |
| LOC110486215 | LOC106607251 | coding | upstream | 98009 | 35789454 ~ 35805064 (-) |
| LOC110486217 | LOC106600984 | coding | upstream | 122832 | 35814277 ~ 35819297 (-) |
| LOC118938069 | LOC106607229 | coding | upstream | 131291 | 35822736 ~ 35825104 (-) |
| cacnb1 | LOC106607253 | coding | upstream | 135297 | 35826742 ~ 35856636 (-) |
| G1170617 | NA | non-coding | downstream | 921 | 35690000 ~ 35690312 (-) |
| G1170616 | NA | non-coding | downstream | 1770 | 35689190 ~ 35689463 (-) |
| G1170612 | NA | non-coding | downstream | 7408 | 35683613 ~ 35683825 (-) |
| G1170611 | NA | non-coding | downstream | 7977 | 35682975 ~ 35683256 (-) |
| G1170625 | NA | non-coding | upstream | 7775 | 35699220 ~ 35699449 (-) |
| G1170628 | NA | non-coding | upstream | 9026 | 35700471 ~ 35720740 (-) |
| G1170627 | NA | non-coding | upstream | 28258 | 35719703 ~ 35720143 (-) |
| G1170578 | NA | non-coding | upstream | 52511 | 35743956 ~ 35745430 (-) |
| G1170590 | NA | non-coding | upstream | 114194 | 35805639 ~ 35806314 (-) |
| LOC110486204 | LOC106607517 | other | downstream | 508586 | 35170206 ~ 35182762 (-) |
| G1168629 | NA | other | downstream | 580222 | 35097452 ~ 35111011 (-) |
| G1168539 | LOC106600802 | other | downstream | 682936 | 35002513 ~ 35008297 (-) |
| G1168559 | NA | other | downstream | 740924 | 34949237 ~ 34950309 (-) |
| si:dkey-89b17.4 | LOC106607502 | other | downstream | 825837 | 34855625 ~ 34879901 (-) |
| G1170691 | rl19 | other | upstream | 170707 | 35862152 ~ 35864644 (-) |
| LOC110485158 | LOC106607258 | other | upstream | 307478 | 35995257 ~ 36000992 (-) |
| G1170811 | NA | other | upstream | 399317 | 36090762 ~ 36091417 (-) |
| G1170826 | NA | other | upstream | 418657 | 36110102 ~ 36110439 (-) |
| G1170998 | NA | other | upstream | 801644 | 36493089 ~ 36493524 (-) |
