Gene
RNA
| Item | Value |
|---|---|
| gene id | G1169061 |
| gene name | LOC106600989 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 35922254 ~ 35922498 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: gap junction gamma-1 protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1333220 | True | 245 | lncRNA | 0.67 | 1 | 35922254 | 35922498 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| st8sia6 | LOC106607255 | coding | upstream | 13011 | 35900832 ~ 35909243 (+) |
| LOC110486219 | rl19 | coding | upstream | 57609 | 35862093 ~ 35864645 (+) |
| LOC118938606 | NA | coding | upstream | 58250 | 35863923 ~ 35864004 (+) |
| LOC118938605 | NA | coding | upstream | 59270 | 35862905 ~ 35862984 (+) |
| trnac-gca-9 | NA | coding | upstream | 110029 | 35812154 ~ 35812225 (+) |
| LOC110486225 | LOC106607261 | coding | downstream | 119273 | 36041771 ~ 36052964 (+) |
| LOC110486228 | LOC106607263 | coding | downstream | 209070 | 36131568 ~ 36167388 (+) |
| LOC110486232 | rprml | coding | downstream | 415568 | 36338066 ~ 36339755 (+) |
| LOC110486233 | LOC106607267 | coding | downstream | 441057 | 36363555 ~ 36368288 (+) |
| LOC118938276 | LOC106607270 | coding | downstream | 534856 | 36457354 ~ 36460939 (+) |
| G1169056 | NA | non-coding | upstream | 2019 | 35919483 ~ 35920235 (+) |
| G1169070 | NA | non-coding | upstream | 38871 | 35883129 ~ 35883383 (+) |
| G1169062 | NA | non-coding | upstream | 48724 | 35873309 ~ 35873530 (+) |
| G1169050 | NA | non-coding | upstream | 52512 | 35869407 ~ 35869742 (+) |
| G1169048 | NA | non-coding | upstream | 53754 | 35868247 ~ 35868500 (+) |
| G1169087 | NA | non-coding | downstream | 8011 | 35930509 ~ 35930892 (+) |
| G1169091 | NA | non-coding | downstream | 13840 | 35936338 ~ 35936574 (+) |
| G1169103 | NA | non-coding | downstream | 34972 | 35957470 ~ 35957684 (+) |
| G1169115 | NA | non-coding | downstream | 53574 | 35976072 ~ 35976634 (+) |
| G1169116 | NA | non-coding | downstream | 54344 | 35976842 ~ 35977062 (+) |
| LOC110486188 | LOC107665142 | other | upstream | 1234604 | 34680909 ~ 34687670 (+) |
| G1166779 | NA | other | upstream | 2118589 | 33790640 ~ 33803665 (+) |
| G1166318 | NA | other | upstream | 2673046 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 2691771 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 3199792 | 32714937 ~ 32722676 (+) |
| G1169121 | LOC106607257 | other | downstream | 67358 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 245130 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 247398 | 36169896 ~ 36171571 (+) |
| LOC110486241 | LOC106607273 | other | downstream | 628523 | 36551021 ~ 36582092 (+) |
