G1169115


Basic Information

Item Value
gene id G1169115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 35976072 ~ 35976634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333274
GACTTTAGTTGGGTCACAGTGGGAAAAGCATTGGGAATCCCTCTGAGGCTGCATAATCATTTATTCTGTCGTCACAGAAAATGGTCACAGTGGCATGCcattcattttctaataaaagctgagtactggggtattgtccagacaaagatttctagtgtagcaatattaagttgtatgaaattaaatcagatgtgaaaaataggctatgcaaaaatgtgggcacccttgtcattctgttgatttgaatacctgtaactacttagcactgattcattggaacacacaattggtttggtgagctcattaagccttgaacttcatagacaagtgcatccaatcatgagaaaaggtatttaaggtggccaattgcaagttgttgttctctttgactctcctctgaagagtggcaacatgggggcctcaaaacaactctcaaatgacctgaaaacaAAGATTGTTCAACATTATGGTTTAGAGGAAGGCTACAAAAAGCTATCGCGGAGATTTAAGCTGTCAGTGTCCACTGTGAGGAAAATAGTGAGAAAATGGAAGACCACAGGCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333274 True 563 lncRNA 0.40 1 35976072 35976634

Neighbor

gene id symbol gene type direction distance location
st8sia6 LOC106607255 coding upstream 66829 35900832 ~ 35909243 (+)
LOC110486219 rl19 coding upstream 111427 35862093 ~ 35864645 (+)
LOC118938606 NA coding upstream 112068 35863923 ~ 35864004 (+)
LOC118938605 NA coding upstream 113088 35862905 ~ 35862984 (+)
trnac-gca-9 NA coding upstream 163847 35812154 ~ 35812225 (+)
LOC110486225 LOC106607261 coding downstream 65137 36041771 ~ 36052964 (+)
LOC110486228 LOC106607263 coding downstream 154934 36131568 ~ 36167388 (+)
LOC110486232 rprml coding downstream 361432 36338066 ~ 36339755 (+)
LOC110486233 LOC106607267 coding downstream 386921 36363555 ~ 36368288 (+)
LOC118938276 LOC106607270 coding downstream 480720 36457354 ~ 36460939 (+)
G1169103 NA non-coding upstream 18388 35957470 ~ 35957684 (+)
G1169091 NA non-coding upstream 39498 35936338 ~ 35936574 (+)
G1169087 NA non-coding upstream 45180 35930509 ~ 35930892 (+)
G1169061 LOC106600989 non-coding upstream 53574 35922254 ~ 35922498 (+)
G1169056 NA non-coding upstream 55837 35919483 ~ 35920235 (+)
G1169116 NA non-coding downstream 208 35976842 ~ 35977062 (+)
G1169133 NA non-coding downstream 26132 36002766 ~ 36003028 (+)
G1169137 NA non-coding downstream 30692 36007326 ~ 36010330 (+)
G1169138 NA non-coding downstream 35218 36011852 ~ 36012768 (+)
G1169139 NA non-coding downstream 36227 36012861 ~ 36013076 (+)
LOC110486188 LOC107665142 other upstream 1288422 34680909 ~ 34687670 (+)
G1166779 NA other upstream 2172407 33790640 ~ 33803665 (+)
G1166318 NA other upstream 2726864 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 2745589 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 3253610 32714937 ~ 32722676 (+)
G1169121 LOC106607257 other downstream 13222 35989856 ~ 35992600 (+)
G1169207 NA other downstream 190994 36167628 ~ 36168331 (+)
G1169208 NA other downstream 193262 36169896 ~ 36171571 (+)
LOC110486241 LOC106607273 other downstream 574387 36551021 ~ 36582092 (+)

Expression


Co-expression Network