G1169116


Basic Information

Item Value
gene id G1169116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 35976842 ~ 35977062 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333275
ctgcacacacgccacaaacggagtcgcttgaggtatgcaaacgcacatttggacaagccagcttcattttggaataaggtgctgtggactgatgaaacaaagactGAGTTATTTGGTCATAACAAGGGACGTTATGCATggcggcaaaagaacacagcgttccaagaaaaacacttgctacccacagtacaatttggtgggggttccatcatgctgtgggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333275 True 221 lncRNA 0.48 1 35976842 35977062

Neighbor

gene id symbol gene type direction distance location
st8sia6 LOC106607255 coding upstream 67599 35900832 ~ 35909243 (+)
LOC110486219 rl19 coding upstream 112197 35862093 ~ 35864645 (+)
LOC118938606 NA coding upstream 112838 35863923 ~ 35864004 (+)
LOC118938605 NA coding upstream 113858 35862905 ~ 35862984 (+)
trnac-gca-9 NA coding upstream 164617 35812154 ~ 35812225 (+)
LOC110486225 LOC106607261 coding downstream 64709 36041771 ~ 36052964 (+)
LOC110486228 LOC106607263 coding downstream 154506 36131568 ~ 36167388 (+)
LOC110486232 rprml coding downstream 361004 36338066 ~ 36339755 (+)
LOC110486233 LOC106607267 coding downstream 386493 36363555 ~ 36368288 (+)
LOC118938276 LOC106607270 coding downstream 480292 36457354 ~ 36460939 (+)
G1169115 NA non-coding upstream 208 35976072 ~ 35976634 (+)
G1169103 NA non-coding upstream 19158 35957470 ~ 35957684 (+)
G1169091 NA non-coding upstream 40268 35936338 ~ 35936574 (+)
G1169087 NA non-coding upstream 45950 35930509 ~ 35930892 (+)
G1169061 LOC106600989 non-coding upstream 54344 35922254 ~ 35922498 (+)
G1169133 NA non-coding downstream 25704 36002766 ~ 36003028 (+)
G1169137 NA non-coding downstream 30264 36007326 ~ 36010330 (+)
G1169138 NA non-coding downstream 34790 36011852 ~ 36012768 (+)
G1169139 NA non-coding downstream 35799 36012861 ~ 36013076 (+)
G1169145 NA non-coding downstream 41923 36018985 ~ 36019194 (+)
LOC110486188 LOC107665142 other upstream 1289192 34680909 ~ 34687670 (+)
G1166779 NA other upstream 2173177 33790640 ~ 33803665 (+)
G1166318 NA other upstream 2727634 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 2746359 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 3254380 32714937 ~ 32722676 (+)
G1169121 LOC106607257 other downstream 12794 35989856 ~ 35992600 (+)
G1169207 NA other downstream 190566 36167628 ~ 36168331 (+)
G1169208 NA other downstream 192834 36169896 ~ 36171571 (+)
LOC110486241 LOC106607273 other downstream 573959 36551021 ~ 36582092 (+)

Expression


Co-expression Network