G1170811


Basic Information

Item Value
gene id G1170811
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36090762 ~ 36091417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1335185
ctttactcagtactttgttgaagcacctttggcaatgattacagcctcttcttgggtatgacgctacaagcttggcacacctgtatttggggtgtttcccccattcttctctgcagatcctctcaagttctgtcaggctggacggatggggagcgttgctacacagctattttcaggtctctccagagatgttcgttcgggttcaagtccaggctttggCTAGgtcactcaagggcattcagagacaacagcgttgtcttggctgtgtgcttagggtcgttgtgccATTGGAAGGTGAACGTTCCCCCgccgtctgaggtcctgagcaccctggagcaggttttcatcaagaatctctctgtactttgctccgttcatctttccctgactagtttccagtccctgccgctgaaaaacacccccacagcatgatgctgccacaaccatgcttcactgtagggatggtgccaggtttcctccagagttgacgcttggcattcaggccaaagagttcaatcttgatttcatcagaccacataatcttgtttatcatggtctgagagtcctttaagtgccaaCTCCAAGCgagttgtcatgtgccttttactgaagagtggcttctgtctggccactctacaataaaggcctgatcagtg

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1335185 True 656 TUCP 0.50 1 36090762 36091417
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110486226 LOC106607262 coding downstream 777 36047634 ~ 36089985 (-)
LOC110486224 phb coding downstream 51505 36035614 ~ 36039257 (-)
LOC110486223 LOC106607259 coding downstream 56111 36007038 ~ 36034651 (-)
LOC110485158 LOC106607258 coding downstream 89770 35995257 ~ 36000992 (-)
eftud2 LOC106607257 coding downstream 98102 35978405 ~ 35992660 (-)
LOC110485159 LOC106607264 coding upstream 146494 36237911 ~ 36281974 (-)
LOC110486229 LOC106607265 coding upstream 194633 36286050 ~ 36296738 (-)
mettl2a LOC106600997 coding upstream 205451 36296868 ~ 36303168 (-)
LOC110486231 LOC106607266 coding upstream 216208 36307625 ~ 36331668 (-)
LOC110486234 LOC106607269 coding upstream 282107 36373524 ~ 36376546 (-)
G1170772 NA non-coding downstream 43422 36046972 ~ 36047340 (-)
G1170791 NA non-coding downstream 47992 36042488 ~ 36042770 (-)
G1170782 NA non-coding downstream 68360 36022149 ~ 36022402 (-)
G1170779 NA non-coding downstream 71485 36018985 ~ 36019277 (-)
G1170814 NA non-coding upstream 6952 36098369 ~ 36098653 (-)
G1170816 NA non-coding upstream 8352 36099769 ~ 36099974 (-)
G1170835 NA non-coding upstream 34318 36125735 ~ 36126416 (-)
G1170849 NA non-coding upstream 58534 36149951 ~ 36150662 (-)
G1170842 NA non-coding upstream 77802 36169219 ~ 36169549 (-)
G1170691 rl19 other downstream 226118 35862152 ~ 35864644 (-)
LOC110486204 LOC106607517 other downstream 908115 35170206 ~ 35182762 (-)
G1168629 NA other downstream 979751 35097452 ~ 35111011 (-)
G1168539 LOC106600802 other downstream 1082465 35002513 ~ 35008297 (-)
G1170826 NA other upstream 18685 36110102 ~ 36110439 (-)
G1170998 NA other upstream 401672 36493089 ~ 36493524 (-)
G1171050 NA other upstream 502637 36594054 ~ 36594526 (-)
G1171051 NA other upstream 504415 36595832 ~ 36596641 (-)
G1171057 hsp70b other upstream 653355 36665169 ~ 36828425 (-)

Expression

G1170811 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G1170811 Expression in each Bioproject

Bar chart with 19 bars.
G1170811 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G249378 NA non-coding NC_047610.1 CM018556.1 4715652 ~ 4718394 (+)
mexican tetra (Astyanax mexicanus) G217566 NA non-coding NC_035921.1 CM008324.1 18423838 ~ 18424758 (-)