G1169182


Basic Information

Item Value
gene id G1169182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36094608 ~ 36094827 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333343
ctggccatGACCTGACCGCATCCACCTTCTTGTCATGCATCCTCACTCCCTGCGGGCTGATTTGGTAGCCTAAGAAGGAGACAGCCTTCCTATGAAATtggcacttctcagccttgacgaaCAGGTGGCTAGCCAGGAAGCGTTCCAGGACTGCTTGAACGTGAGCGATGTGATCCTCCAGGGTAGCCGAGTAGACCAggatgtcatcgatatacacaAC

Function

NR:

description
LOW QUALITY PROTEIN: uncharacterized protein LOC111196400

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333343 True 220 lncRNA 0.54 1 36094608 36094827

Neighbor

gene id symbol gene type direction distance location
LOC110486225 LOC106607261 coding upstream 46800 36041771 ~ 36052964 (+)
st8sia6 LOC106607255 coding upstream 185365 35900832 ~ 35909243 (+)
LOC110486219 rl19 coding upstream 229963 35862093 ~ 35864645 (+)
LOC110486228 LOC106607263 coding downstream 36741 36131568 ~ 36167388 (+)
LOC110486232 rprml coding downstream 243239 36338066 ~ 36339755 (+)
LOC110486233 LOC106607267 coding downstream 268728 36363555 ~ 36368288 (+)
LOC118938276 LOC106607270 coding downstream 362527 36457354 ~ 36460939 (+)
LOC110486240 LOC106601006 coding downstream 430812 36525639 ~ 36547943 (+)
G1169160 NA non-coding upstream 41180 36053078 ~ 36053428 (+)
G1169163 NA non-coding upstream 54577 36039773 ~ 36040031 (+)
G1169162 NA non-coding upstream 60028 36034330 ~ 36034580 (+)
G1169156 NA non-coding upstream 61597 36032781 ~ 36033011 (+)
G1169185 NA non-coding downstream 6124 36100951 ~ 36101230 (+)
G1169192 NA non-coding downstream 15422 36110249 ~ 36110475 (+)
G1169194 NA non-coding downstream 17405 36112232 ~ 36112432 (+)
G1169247 NA non-coding downstream 114658 36209485 ~ 36210121 (+)
G1169286 NA non-coding downstream 171643 36266470 ~ 36266905 (+)
G1169121 LOC106607257 other upstream 102008 35989856 ~ 35992600 (+)
LOC110486188 LOC107665142 other upstream 1406958 34680909 ~ 34687670 (+)
G1166779 NA other upstream 2290943 33790640 ~ 33803665 (+)
G1166318 NA other upstream 2845400 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 2864125 33001356 ~ 33230495 (+)
G1169207 NA other downstream 72801 36167628 ~ 36168331 (+)
G1169208 NA other downstream 75069 36169896 ~ 36171571 (+)
LOC110486241 LOC106607273 other downstream 456194 36551021 ~ 36582092 (+)
G1169532 LOC106607276 other downstream 575532 36670359 ~ 36671403 (+)

Expression


Co-expression Network