G1169208


Basic Information

Item Value
gene id G1169208
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36169896 ~ 36171571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333369
TCGGGTTCACATACTTTCAAGCAGCTTTGTAACTAGTCTGTCCCACTggacacagacgtcagttcagcgtctattccacattggttcaacgtaattttgTTAATGTTGTGGACGTTGATGCAACCAGTGTGTGCCCGGTGAGGTGTGACCATCTTCTTGTTATTACTCAGCCCAAACAGATGAATGTTAGCTGGGGGTCCAGCCTAATCTAACTCCCCTATACAGCTCCATTAATTATTCACACTTAAAATGAAGTGCTTTGTAATGTCAAAACTAGTAGCAACTGAGCTGCCACCAACGAGAAGGAGACGAAAACTTAACTTTACTTGAGTTTTGaaaccccctttttctccccaattttgtgatatccaattacaatcttgtctcatcgttgcaactccccaacaggctcaggagaggtgaaggtcgagtcataCGTCCTCCGAAACCCTCGGGAGGCCCCGTTGTAACACCTTTTAATCAAGTGTTGTGCAACAGCTTGCTGGGGACAGGGAGCCTACCGGAAAAGGTTGAAAACACAATTTTTGTGTTCGTATTCTGTTTAGTGCAGAATTATATACCTTCTCTTTTGGTTTCATTTcctctcttttttttgttgttgtactttttctccccaattgttagttacagtcttgtcccatcgctgcaactcccctacagaTTCAggggaggcgaaggttgagagccatgcgtcctccgaaacctgaccctgccaagccacactgcttgcttaacccgcaccaatgtgtcggaggaagcaCCATCCAGCTGGCgactgaagtcagcttgcaggcgcatGGCCAACACAAGGAGTCACTACAGCGTGGTGAGAGAGGGAAATCCCAgccggccaacccctcccctaacccggacgacgctggaccaattgtgtgccgcctcatgggtctcctggtcatgGCCGGCTGTGACGCAGCCTGTGATCGAAACCgggcctgtagtgacgccttaagcactgtgatgcagtgccttagaccgctgcgccactcgggaggccccgtTTCCTCTCTTTAAAGCTTCTTAACACTATTATGGTGTGTCAAATCCTGTCTAGTGCAGAATTAGATCACTTTTTCTGGAGTATTTTCAACATTGATGTATGTATCTGGTCATTTGCCAGTTTAACCCATTTTGGTAGgcattgttgagcacagtgctcaATCCACTAGCAGTAACTAGAGGTTTTACAACAAGCGTTGCAGGATATGGTATTTGCCTCTACCATCAAAAGTTGGTTGAACGTAATTTTGCCTTATGGTTTTGATATCCGTTGATCATGAGGTGAGGTGATCCATTACACCTCATAGTGAAACAAAATGCTTAATATGAAAATATAAGTACACTATTATTTCTTCAAACACGCACACAACATTGTGTAAAAGATGTGGAATTACCCATAAACTCTGTAAAAACAGAGCCACGTGGCAAGATAGGaaggagatttttttttaaatacttccAATGAATTCAATCACTAAATATTCTCTTATCTTTGGCTATCCTCATAAAATTCTTACATTTTGAACAACATAATTGGTTTTATTCTCAAAATGTTTGGTAAAATAAAACGAACAAATCACTGAAATGACTTGCATTCATTTTTATTAAGTATatggttattattattttattatttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333369 True 1676 TUCP 0.43 1 36169896 36171571

Neighbor

gene id symbol gene type direction distance location
LOC110486228 LOC106607263 coding upstream 2508 36131568 ~ 36167388 (+)
LOC110486225 LOC106607261 coding upstream 122088 36041771 ~ 36052964 (+)
st8sia6 LOC106607255 coding upstream 260653 35900832 ~ 35909243 (+)
LOC118938606 NA coding upstream 305892 35863923 ~ 35864004 (+)
LOC118938605 NA coding upstream 306912 35862905 ~ 35862984 (+)
LOC110486232 rprml coding downstream 166495 36338066 ~ 36339755 (+)
LOC110486233 LOC106607267 coding downstream 191984 36363555 ~ 36368288 (+)
LOC118938276 LOC106607270 coding downstream 285783 36457354 ~ 36460939 (+)
LOC110486240 LOC106601006 coding downstream 354068 36525639 ~ 36547943 (+)
LOC110486241 LOC106607273 coding downstream 389759 36551021 ~ 36582092 (+)
G1169194 NA non-coding upstream 57464 36112232 ~ 36112432 (+)
G1169192 NA non-coding upstream 59421 36110249 ~ 36110475 (+)
G1169185 NA non-coding upstream 68666 36100951 ~ 36101230 (+)
G1169182 NA non-coding upstream 75069 36094608 ~ 36094827 (+)
G1169160 NA non-coding upstream 116468 36053078 ~ 36053428 (+)
G1169247 NA non-coding downstream 37914 36209485 ~ 36210121 (+)
G1169286 NA non-coding downstream 94899 36266470 ~ 36266905 (+)
G1169315 NA non-coding downstream 134885 36306456 ~ 36306664 (+)
G1169366 LOC106607269 non-coding downstream 201995 36373566 ~ 36425661 (+)
G1169444 NA non-coding downstream 331165 36502736 ~ 36503327 (+)
G1169207 NA other upstream 1565 36167628 ~ 36168331 (+)
G1169121 LOC106607257 other upstream 177296 35989856 ~ 35992600 (+)
LOC110486188 LOC107665142 other upstream 1482246 34680909 ~ 34687670 (+)
G1166779 NA other upstream 2366231 33790640 ~ 33803665 (+)
G1166318 NA other upstream 2920688 33239953 ~ 33249208 (+)
G1169532 LOC106607276 other downstream 498788 36670359 ~ 36671403 (+)
G1169542 NA other downstream 530701 36702272 ~ 36703736 (+)
G1169468 hsp70b other downstream 599217 36743291 ~ 36819540 (+)

Expression


Co-expression Network