G1169315


Basic Information

Item Value
gene id G1169315
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36306456 ~ 36306664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333483
aacttctacagatgcacaatcgagagcatcctgtcgggctgtatcaccgcctggtacggcaactgctccgcccacaaccgtaaggctctccagagggtagtgaggtctgtacaacgcatcaccgggggcaaactacctgccctccaggacacctacaccacccgatgtcacaggaaggccataaagatcatcaaagacaacaaccaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333483 True 209 lncRNA 0.56 1 36306456 36306664

Neighbor

gene id symbol gene type direction distance location
LOC110486228 LOC106607263 coding upstream 139068 36131568 ~ 36167388 (+)
LOC110486225 LOC106607261 coding upstream 258648 36041771 ~ 36052964 (+)
st8sia6 LOC106607255 coding upstream 397213 35900832 ~ 35909243 (+)
LOC118938606 NA coding upstream 442452 35863923 ~ 35864004 (+)
LOC118938605 NA coding upstream 443472 35862905 ~ 35862984 (+)
LOC110486232 rprml coding downstream 31402 36338066 ~ 36339755 (+)
LOC110486233 LOC106607267 coding downstream 56891 36363555 ~ 36368288 (+)
LOC118938276 LOC106607270 coding downstream 150690 36457354 ~ 36460939 (+)
LOC110486240 LOC106601006 coding downstream 218975 36525639 ~ 36547943 (+)
LOC110486241 LOC106607273 coding downstream 254666 36551021 ~ 36582092 (+)
G1169286 NA non-coding upstream 39551 36266470 ~ 36266905 (+)
G1169247 NA non-coding upstream 96335 36209485 ~ 36210121 (+)
G1169194 NA non-coding upstream 194024 36112232 ~ 36112432 (+)
G1169192 NA non-coding upstream 195981 36110249 ~ 36110475 (+)
G1169185 NA non-coding upstream 205226 36100951 ~ 36101230 (+)
G1169366 LOC106607269 non-coding downstream 66902 36373566 ~ 36425661 (+)
G1169444 NA non-coding downstream 196072 36502736 ~ 36503327 (+)
G1169371 NA non-coding downstream 198966 36505630 ~ 36507309 (+)
G1169489 NA non-coding downstream 263001 36569665 ~ 36569882 (+)
G1169208 NA other upstream 134885 36169896 ~ 36171571 (+)
G1169207 NA other upstream 138125 36167628 ~ 36168331 (+)
G1169121 LOC106607257 other upstream 313856 35989856 ~ 35992600 (+)
LOC110486188 LOC107665142 other upstream 1618806 34680909 ~ 34687670 (+)
G1166779 NA other upstream 2502791 33790640 ~ 33803665 (+)
G1169532 LOC106607276 other downstream 363695 36670359 ~ 36671403 (+)
G1169542 NA other downstream 395608 36702272 ~ 36703736 (+)
G1169468 hsp70b other downstream 464124 36743291 ~ 36819540 (+)

Expression


Co-expression Network