G1169444


Basic Information

Item Value
gene id G1169444
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36502736 ~ 36503327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333628
aagacatcaaaactgtgaaataacccatatggaatcatgtagtaaccaaaaaagtgttaaacaaatcaaaatatattttagatttgagattcttcaagcagccttgatgacagctttgcatactcttggcattctctcaaacagcttaatctggaatgcttttccaacagtcttgaatgagttcccacatatgctgagctcttgttggctgtttttcctttcactctgcggtccaactcatcccaaaccatctcaattgggttgaggttgggtgattgtggaggccaggtcatctaatgcagcacttcatcactctccttggtcaaatagcccttacacagcctagaggtgtgttgggtcattgtcctgtggaaaaacaaatgatagtcccactaacagCAAACCagatggaccgcagagtgaaggaaaaggagccaacaagagctcagcatatgtgggaactccttcaagactgttggaaaagcattccaggtgaagctggttgagagactgccaagagtgtgcaaagctgtcatcaaggcaagggtggctactttgaagaatctcaaatataaaatatatttggatttgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333628 True 592 lncRNA 0.42 1 36502736 36503327

Neighbor

gene id symbol gene type direction distance location
LOC118938276 LOC106607270 coding upstream 41797 36457354 ~ 36460939 (+)
LOC110486233 LOC106607267 coding upstream 134448 36363555 ~ 36368288 (+)
LOC110486232 rprml coding upstream 162981 36338066 ~ 36339755 (+)
LOC110486228 LOC106607263 coding upstream 335348 36131568 ~ 36167388 (+)
LOC110486225 LOC106607261 coding upstream 454928 36041771 ~ 36052964 (+)
LOC110486240 LOC106601006 coding downstream 22312 36525639 ~ 36547943 (+)
LOC110486241 LOC106607273 coding downstream 58003 36551021 ~ 36582092 (+)
LOC110486244 LOC106607274 coding downstream 129119 36632446 ~ 36664344 (+)
LOC110486247 LOC106607277 coding downstream 168981 36672308 ~ 36677819 (+)
LOC110487537 LOC106601013 coding downstream 181769 36685096 ~ 36687505 (+)
G1169366 LOC106607269 non-coding upstream 77075 36373566 ~ 36425661 (+)
G1169315 NA non-coding upstream 196072 36306456 ~ 36306664 (+)
G1169286 NA non-coding upstream 235831 36266470 ~ 36266905 (+)
G1169247 NA non-coding upstream 292615 36209485 ~ 36210121 (+)
G1169194 NA non-coding upstream 390304 36112232 ~ 36112432 (+)
G1169371 NA non-coding downstream 2303 36505630 ~ 36507309 (+)
G1169489 NA non-coding downstream 66338 36569665 ~ 36569882 (+)
G1169496 NA non-coding downstream 85181 36588508 ~ 36588731 (+)
G1169208 NA other upstream 331165 36169896 ~ 36171571 (+)
G1169207 NA other upstream 334405 36167628 ~ 36168331 (+)
G1169121 LOC106607257 other upstream 510136 35989856 ~ 35992600 (+)
LOC110486188 LOC107665142 other upstream 1815086 34680909 ~ 34687670 (+)
G1169532 LOC106607276 other downstream 167032 36670359 ~ 36671403 (+)
G1169542 NA other downstream 198945 36702272 ~ 36703736 (+)
G1169468 hsp70b other downstream 267461 36743291 ~ 36819540 (+)
G1169472 NA other downstream 281485 36784812 ~ 36812201 (+)

Expression


Co-expression Network