G1169371


Basic Information

Item Value
gene id G1169371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36505630 ~ 36507309 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333553
ATGATTTCCTTTAATAAATTGAACCGAGAAAACACATATTACAAAATATCATCTTTTACAGTCACATGGTCACATGAAACCCAAAGCCAGATCTCTTCCCAATTTCTCCCttcccaaaacaaaacaaaggaaacaaCCATGGACCATCGTTTTAACATGTAACTTTGTCTTTAAAGTAGAAAATAATCACACAAAACATATTTGCTGCACAGAGTTAGGCAGGGAGGCAAGAGATAACACAAGGCTATCAGAGATCATCAGGGAAAGCtttggagagaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggtctatAGGTGTCCAGTCACTATGGGGTTGGGTGACCGGCTTGCTAGCTGTGAACAGAGGGTCAATGAAAGACTAGTGAGTATAGTAGAGCAGTTAATGACACAGTGTCAGAGTGTGTTTTCTGCCAGTGTGTAGCAGAGGAAGTATGAGGGTTAAGAGAGGCACACGAATCTGTTATTAGAGAGCGCGAGCGATCGAGAATGAACATGTTCATTTCTACATGGGAACGCTAACTGAGGCTGACATACATAGATTGAGCGAGAGAAACAACAAGAGGAGATAGGACTGAGACCCAATACCTTATTTTACAGTACCTTTGACCAAGGACACACAAGGTATGATAATTTATTTTGAGCCATGCCTTCGCTTGTTAATGTGCCTTCCAGAACAGAAGAAACAACTCAACTCTTCCGTGTGGGCAAAGATCATTCAGGGGTTGCTAAGGACACAAAGGAGGCACGAGGTTGAAAGTCAGGAGCCCGCTAGCATGATGAGACTGACTGAGTAGTTAACTCGCTCGCAGTCCCAGTGTTTCACATCTGTACCCCTAGTTAACCACCTCTACATTTCAGACTTGTTCTTTGTTCCACCGGTGTCATACGTAGCAGACACCAACCCCCACCCATTCAACCGCAGATGAAAAGGAGTGAGGACACCAGACTCCAAAACCCACTGATAGCCTCGTCGTTAGAGGGCACTGCAGTAGACATAACAATCATTTGAGTTGCAAATGAAACAAAAGAAAATCACATTCCATGTGTGGAACCAACTTCTTCAGCAAGTCAGGAGGTCCAGGAGGAGGGGCAGTGTTAGTGATTGAAGGGTGTGGAACTTTGTCCCACCCCCAGGTCTAGAACCCTCACCAAGGCCCAACCccagtctgtttgtctgtctgtctagagtGGGGCTTAGTTTGTCCTTTAGCCAAACCAACACTGGCATCTTCACAATAACATCCTCCAAATATCCAGACCCAAAGACCTGCTCTTTTCTCCAGACTAACAATCTCACAGCCATCTACCTCACATCTTCCAATATACACAACCTGCTCAGGTGAGCTGCTCTTCTGTTCCCACCTAGAGAGATTGCTGTATAGTATCATCATTATCAGTAGAGTAGGAGTCCCTGGCTCCTGTCCCTGTAGGTCGGTCCACTCTACCCCAGGTCTCTAAACAGGCCCACCCAGGATCAGCGAGCGGTCCTGTGGGCAAAGCGGAGGTCCTGGTCCTTGGGGAACTGTGCTGGGATAGCAGAGGCAGTGGGTTCCATGCCAGTAGGAGGCTCTCTGGCAGGGGATGGTTTAGGGGAGTCAGTCATCCAGGCAGGGGGTGGCTGTCCCCGGACAGGGGTGCCCA

Function

NR:

description
cyclin-dependent kinase 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333553 True 1680 lncRNA 0.47 1 36505630 36507309

Neighbor

gene id symbol gene type direction distance location
LOC118938276 LOC106607270 coding upstream 44691 36457354 ~ 36460939 (+)
LOC110486233 LOC106607267 coding upstream 137342 36363555 ~ 36368288 (+)
LOC110486232 rprml coding upstream 165875 36338066 ~ 36339755 (+)
LOC110486228 LOC106607263 coding upstream 338242 36131568 ~ 36167388 (+)
LOC110486225 LOC106607261 coding upstream 457822 36041771 ~ 36052964 (+)
LOC110486240 LOC106601006 coding downstream 18330 36525639 ~ 36547943 (+)
LOC110486241 LOC106607273 coding downstream 54021 36551021 ~ 36582092 (+)
LOC110486244 LOC106607274 coding downstream 125137 36632446 ~ 36664344 (+)
LOC110486247 LOC106607277 coding downstream 164999 36672308 ~ 36677819 (+)
LOC110487537 LOC106601013 coding downstream 177787 36685096 ~ 36687505 (+)
G1169444 NA non-coding upstream 2303 36502736 ~ 36503327 (+)
G1169366 LOC106607269 non-coding upstream 79969 36373566 ~ 36425661 (+)
G1169315 NA non-coding upstream 198966 36306456 ~ 36306664 (+)
G1169286 NA non-coding upstream 238725 36266470 ~ 36266905 (+)
G1169247 NA non-coding upstream 295509 36209485 ~ 36210121 (+)
G1169489 NA non-coding downstream 62356 36569665 ~ 36569882 (+)
G1169496 NA non-coding downstream 81199 36588508 ~ 36588731 (+)
G1169498 NA non-coding downstream 86701 36594010 ~ 36594465 (+)
G1169208 NA other upstream 334059 36169896 ~ 36171571 (+)
G1169207 NA other upstream 337299 36167628 ~ 36168331 (+)
G1169121 LOC106607257 other upstream 513030 35989856 ~ 35992600 (+)
LOC110486188 LOC107665142 other upstream 1817980 34680909 ~ 34687670 (+)
G1169532 LOC106607276 other downstream 163050 36670359 ~ 36671403 (+)
G1169542 NA other downstream 194963 36702272 ~ 36703736 (+)
G1169468 hsp70b other downstream 263479 36743291 ~ 36819540 (+)
G1169472 NA other downstream 277503 36784812 ~ 36812201 (+)

Expression


Co-expression Network