G1169489


Basic Information

Item Value
gene id G1169489
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36569665 ~ 36569882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333693
CAGTAGAATAGAAGCTTGATCAACCCTCTCTGGATGACCAAGATGAGATTTACATCAAACTGGAACCTGCTCTGATCACATGCCTTATTTATTactacattctgtctctctctccctttcttccttaaccccccatctctctttttgctctctctctctcaccccctaccctctctcctctctctcttaacccctcctctctccccctctctcccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333693 True 218 lncRNA 0.48 1 36569665 36569882

Neighbor

gene id symbol gene type direction distance location
LOC110486240 LOC106601006 coding upstream 21722 36525639 ~ 36547943 (+)
LOC118938276 LOC106607270 coding upstream 108726 36457354 ~ 36460939 (+)
LOC110486233 LOC106607267 coding upstream 201377 36363555 ~ 36368288 (+)
LOC110486232 rprml coding upstream 229910 36338066 ~ 36339755 (+)
LOC110486228 LOC106607263 coding upstream 402277 36131568 ~ 36167388 (+)
LOC110486244 LOC106607274 coding downstream 62564 36632446 ~ 36664344 (+)
LOC110486247 LOC106607277 coding downstream 102426 36672308 ~ 36677819 (+)
LOC110487537 LOC106601013 coding downstream 115214 36685096 ~ 36687505 (+)
LOC110486255 LOC106607286 coding downstream 280188 36850070 ~ 36854713 (+)
LOC118938285 NA coding downstream 607624 37177506 ~ 37178602 (+)
G1169371 NA non-coding upstream 62356 36505630 ~ 36507309 (+)
G1169444 NA non-coding upstream 66338 36502736 ~ 36503327 (+)
G1169366 LOC106607269 non-coding upstream 144004 36373566 ~ 36425661 (+)
G1169315 NA non-coding upstream 263001 36306456 ~ 36306664 (+)
LOC110486241 LOC106607273 non-coding downstream 10293 36551021 ~ 36582092 (+)
G1169496 NA non-coding downstream 18626 36588508 ~ 36588731 (+)
G1169498 NA non-coding downstream 24128 36594010 ~ 36594465 (+)
G1169499 NA non-coding downstream 24839 36594721 ~ 36595178 (+)
G1169504 NA non-coding downstream 39296 36609178 ~ 36609443 (+)
G1169208 NA other upstream 398094 36169896 ~ 36171571 (+)
G1169207 NA other upstream 401334 36167628 ~ 36168331 (+)
G1169121 LOC106607257 other upstream 577065 35989856 ~ 35992600 (+)
G1169532 LOC106607276 other downstream 100477 36670359 ~ 36671403 (+)
G1169542 NA other downstream 132390 36702272 ~ 36703736 (+)
G1169468 hsp70b other downstream 200906 36743291 ~ 36819540 (+)
G1169472 NA other downstream 214930 36784812 ~ 36812201 (+)
G1169476 NA other downstream 222029 36791911 ~ 36799968 (+)

Expression


Co-expression Network