G1169498


Basic Information

Item Value
gene id G1169498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36594010 ~ 36594465 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333702
atgtatacagagaagagagtcggtccaagaattgaaccctgtggcacccccatagagactgccagaggtccggacaacagaccctcagatttgacacactgaactctatcagagaagtagttggtgaaccaggcgaggcaatcatttgagaaaccaaggctgtcgagtctgccgatgaggatgtggtgattgacagagtcgaaagccttggccagatcaatgaatacggctgcacagtaatgtttcttatcgatggcggttaagatatcgtttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaaccagattgcatagcagagaaggtatagtgagattcaaaatggtcggtaatctgtttgttgacttggctttcgaagaccttagaaaggcatggtaggatagatataggtctgtagcagtttgggtcaagagtgtccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333702 True 456 lncRNA 0.48 1 36594010 36594465

Neighbor

gene id symbol gene type direction distance location
LOC110486241 LOC106607273 coding upstream 11918 36551021 ~ 36582092 (+)
LOC110486240 LOC106601006 coding upstream 46067 36525639 ~ 36547943 (+)
LOC118938276 LOC106607270 coding upstream 133071 36457354 ~ 36460939 (+)
LOC110486233 LOC106607267 coding upstream 225722 36363555 ~ 36368288 (+)
LOC110486232 rprml coding upstream 254255 36338066 ~ 36339755 (+)
LOC110486244 LOC106607274 coding downstream 37981 36632446 ~ 36664344 (+)
LOC110486247 LOC106607277 coding downstream 77843 36672308 ~ 36677819 (+)
LOC110487537 LOC106601013 coding downstream 90631 36685096 ~ 36687505 (+)
LOC110486255 LOC106607286 coding downstream 255605 36850070 ~ 36854713 (+)
LOC118938285 NA coding downstream 583041 37177506 ~ 37178602 (+)
G1169496 NA non-coding upstream 5279 36588508 ~ 36588731 (+)
G1169489 NA non-coding upstream 24128 36569665 ~ 36569882 (+)
G1169371 NA non-coding upstream 86701 36505630 ~ 36507309 (+)
G1169499 NA non-coding downstream 256 36594721 ~ 36595178 (+)
G1169504 NA non-coding downstream 14713 36609178 ~ 36609443 (+)
G1169506 NA non-coding downstream 22006 36616471 ~ 36616756 (+)
G1169538 NA non-coding downstream 98724 36693189 ~ 36694410 (+)
G1169468 hsp70b non-coding downstream 148826 36743291 ~ 36819540 (+)
G1169208 NA other upstream 422439 36169896 ~ 36171571 (+)
G1169207 NA other upstream 425679 36167628 ~ 36168331 (+)
G1169121 LOC106607257 other upstream 601410 35989856 ~ 35992600 (+)
G1169532 LOC106607276 other downstream 75894 36670359 ~ 36671403 (+)
G1169542 NA other downstream 107807 36702272 ~ 36703736 (+)
G1169472 NA other downstream 190347 36784812 ~ 36812201 (+)
G1169476 NA other downstream 197446 36791911 ~ 36799968 (+)

Expression


Co-expression Network