G1169587


Basic Information

Item Value
gene id G1169587
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36880174 ~ 36880373 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333798
gagtGTGAAATGAACATTAGCATGAGCacttagcattttaaaaggcacTGGCTGTCACGTCACACTACCAGACATGAATGCAGGCTTTGAGACTCTTTCTGTCATGAAAAGCGCTATAGAAGTTGAATACATTCTTTATTACACGTTCTCTAAATAAGGCTTCGGTCTCGATCACTATCCGACGATTCAATGTGCTACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333798 True 200 lncRNA 0.41 1 36880174 36880373

Neighbor

gene id symbol gene type direction distance location
LOC110486255 LOC106607286 coding upstream 25461 36850070 ~ 36854713 (+)
LOC110487537 LOC106601013 coding upstream 192669 36685096 ~ 36687505 (+)
LOC110486247 LOC106607277 coding upstream 202355 36672308 ~ 36677819 (+)
LOC110486244 LOC106607274 coding upstream 215830 36632446 ~ 36664344 (+)
LOC110486241 LOC106607273 coding upstream 298082 36551021 ~ 36582092 (+)
LOC118938285 NA coding downstream 297133 37177506 ~ 37178602 (+)
LOC110486264 LOC106601026 coding downstream 577861 37458234 ~ 37479500 (+)
LOC110487538 LOC106607392 coding downstream 685258 37565631 ~ 37567727 (+)
LOC110486266 LOC106607393 coding downstream 700375 37580748 ~ 37586162 (+)
LOC110485165 LOC106600980 coding downstream 737714 37618087 ~ 37619016 (+)
G1169586 NA non-coding upstream 439 36879530 ~ 36879735 (+)
G1169585 NA non-coding upstream 2573 36877401 ~ 36877601 (+)
G1169583 LOC106607288 non-coding upstream 4198 36875417 ~ 36875976 (+)
G1169581 NA non-coding upstream 6805 36873149 ~ 36873369 (+)
G1169578 NA non-coding upstream 10003 36869767 ~ 36870171 (+)
G1169588 NA non-coding downstream 1366 36881739 ~ 36882029 (+)
G1169589 NA non-coding downstream 2914 36883287 ~ 36883525 (+)
G1169595 NA non-coding downstream 15520 36895893 ~ 36896104 (+)
G1169598 NA non-coding downstream 20503 36900876 ~ 36901095 (+)
G1169601 NA non-coding downstream 23668 36904041 ~ 36904453 (+)
G1169468 hsp70b other upstream 60634 36743291 ~ 36819540 (+)
G1169472 NA other upstream 67973 36784812 ~ 36812201 (+)
G1169476 NA other upstream 80206 36791911 ~ 36799968 (+)
G1169542 NA other upstream 176438 36702272 ~ 36703736 (+)
G1169532 LOC106607276 other upstream 208771 36670359 ~ 36671403 (+)
LOC110485168 LOC106601036 other downstream 762725 37638974 ~ 37646678 (+)
G1170195 NA other downstream 1141476 38021849 ~ 38022521 (+)
G1170288 NA other downstream 1328862 38209235 ~ 38209521 (+)
G1170322 NA other downstream 1382041 38262414 ~ 38262853 (+)
G1170455 NA other downstream 1709399 38589772 ~ 38590707 (+)

Expression


Co-expression Network