G1169589


Basic Information

Item Value
gene id G1169589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 36883287 ~ 36883525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1333800
ggccagtaGTGCACTAAACTGGGAATAAGGTGTCATTTAGGACACCTCCTAGGAAAGCAGAAAGGTGAGACTGGAAGAGGGGGAAGGGTCCTGGTGATTAATGCCATAGCTGTATTGGTCTGCTGTGTGTTATATTAGCTAGGTCACATAGCCGCTATAGTCTAATTATTCTGTGCCAGAAGTCTGAGGTGGGTGTCATTTGCTGTTATTAACTCTTGAAGGCTGGTTGAATTCTAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1333800 True 239 lncRNA 0.46 1 36883287 36883525

Neighbor

gene id symbol gene type direction distance location
LOC110486255 LOC106607286 coding upstream 28574 36850070 ~ 36854713 (+)
LOC110487537 LOC106601013 coding upstream 195782 36685096 ~ 36687505 (+)
LOC110486247 LOC106607277 coding upstream 205468 36672308 ~ 36677819 (+)
LOC110486244 LOC106607274 coding upstream 218943 36632446 ~ 36664344 (+)
LOC110486241 LOC106607273 coding upstream 301195 36551021 ~ 36582092 (+)
LOC118938285 NA coding downstream 293981 37177506 ~ 37178602 (+)
LOC110486264 LOC106601026 coding downstream 574709 37458234 ~ 37479500 (+)
LOC110487538 LOC106607392 coding downstream 682106 37565631 ~ 37567727 (+)
LOC110486266 LOC106607393 coding downstream 697223 37580748 ~ 37586162 (+)
LOC110485165 LOC106600980 coding downstream 734562 37618087 ~ 37619016 (+)
G1169588 NA non-coding upstream 1258 36881739 ~ 36882029 (+)
G1169587 NA non-coding upstream 2914 36880174 ~ 36880373 (+)
G1169586 NA non-coding upstream 3552 36879530 ~ 36879735 (+)
G1169585 NA non-coding upstream 5686 36877401 ~ 36877601 (+)
G1169583 LOC106607288 non-coding upstream 7311 36875417 ~ 36875976 (+)
G1169595 NA non-coding downstream 12368 36895893 ~ 36896104 (+)
G1169598 NA non-coding downstream 17351 36900876 ~ 36901095 (+)
G1169601 NA non-coding downstream 20516 36904041 ~ 36904453 (+)
G1169602 NA non-coding downstream 23284 36906809 ~ 36907053 (+)
G1169612 NA non-coding downstream 44235 36927760 ~ 36927994 (+)
G1169468 hsp70b other upstream 63747 36743291 ~ 36819540 (+)
G1169472 NA other upstream 71086 36784812 ~ 36812201 (+)
G1169476 NA other upstream 83319 36791911 ~ 36799968 (+)
G1169542 NA other upstream 179551 36702272 ~ 36703736 (+)
G1169532 LOC106607276 other upstream 211884 36670359 ~ 36671403 (+)
LOC110485168 LOC106601036 other downstream 759573 37638974 ~ 37646678 (+)
G1170195 NA other downstream 1138324 38021849 ~ 38022521 (+)
G1170288 NA other downstream 1325710 38209235 ~ 38209521 (+)
G1170322 NA other downstream 1378889 38262414 ~ 38262853 (+)
G1170455 NA other downstream 1706247 38589772 ~ 38590707 (+)

Expression


Co-expression Network