Gene
RNA
| Item | Value |
|---|---|
| gene id | G1171241 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 37039442 ~ 37045411 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1335734 | True | 285 | lncRNA | 0.36 | 2 | 37039442 | 37045411 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486253 | LOC106607285 | coding | downstream | 187382 | 36840781 ~ 36852060 (-) |
| LOC110485160 | hsp70b | coding | downstream | 210943 | 36825231 ~ 36828499 (-) |
| LOC118936524 | hsp70b | coding | downstream | 211015 | 36818369 ~ 36828427 (-) |
| LOC118938278 | hsp70b | coding | downstream | 224837 | 36811495 ~ 36814605 (-) |
| LOC118938284 | hsp70b | coding | downstream | 230279 | 36805853 ~ 36809163 (-) |
| LOC110485163 | LOC106607291 | coding | upstream | 70028 | 37115439 ~ 37120056 (-) |
| LOC110486259 | kat2a | coding | upstream | 75177 | 37120588 ~ 37133109 (-) |
| LOC110486260 | LOC106601022 | coding | upstream | 88408 | 37133819 ~ 37151534 (-) |
| LOC110485164 | LOC106607293 | coding | upstream | 107018 | 37152429 ~ 37182020 (-) |
| LOC110486261 | LOC106601048 | coding | upstream | 138370 | 37183781 ~ 37186986 (-) |
| G1171184 | NA | non-coding | downstream | 93039 | 36946069 ~ 36946403 (-) |
| LOC110485161 | LOC106607288 | non-coding | downstream | 110042 | 36857430 ~ 37073395 (-) |
| G1171174 | NA | non-coding | downstream | 113498 | 36925678 ~ 36925944 (-) |
| G1171173 | NA | non-coding | downstream | 114835 | 36924377 ~ 36924607 (-) |
| G1171169 | NA | non-coding | downstream | 124385 | 36914837 ~ 36915057 (-) |
| G1171293 | NA | non-coding | upstream | 55876 | 37101287 ~ 37101935 (-) |
| G1171296 | NA | non-coding | upstream | 61403 | 37106814 ~ 37107063 (-) |
| G1171325 | NA | non-coding | upstream | 134423 | 37179834 ~ 37180108 (-) |
| G1171330 | NA | non-coding | upstream | 141766 | 37187177 ~ 37187453 (-) |
| G1171331 | NA | non-coding | upstream | 142520 | 37187931 ~ 37188219 (-) |
| G1171149 | NA | other | downstream | 155102 | 36884018 ~ 36884340 (-) |
| G1171057 | hsp70b | other | downstream | 211017 | 36665169 ~ 36828425 (-) |
| G1171051 | NA | other | downstream | 442801 | 36595832 ~ 36596641 (-) |
| G1171050 | NA | other | downstream | 444916 | 36594054 ~ 36594526 (-) |
| G1170998 | NA | other | downstream | 545918 | 36493089 ~ 36493524 (-) |
| G1171337 | NA | other | upstream | 152817 | 37198228 ~ 37198640 (-) |
| LOC110486310 | LOC106601114 | other | upstream | 2135363 | 39136920 ~ 39183852 (-) |
| LOC110486313 | snn | other | upstream | 2202741 | 39248150 ~ 39250310 (-) |
| LOC110486318 | kdm8 | other | upstream | 2282805 | 39328216 ~ 39331966 (-) |
| G1173645 | NA | other | upstream | 2878511 | 39923922 ~ 39924959 (-) |
