G1171764


Basic Information

Item Value
gene id G1171764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 38151772 ~ 38165790 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1336327
aggatgaccacatcagtgactcaacccactcaggtgacgcaccccctccagggacggcatgagagagccccagtaaagccagtgactcagcccctgtaaagccagtgactcagcccctgtaatagggttagaggcagagaatcccagtggaaagaggggaaccggccaggcagagacagcaagggtggttcgttgctccagagcctttccgttcaccctcccactcctgggccagactacactcaatcatatgacccactgaagagatgagtcttcagtagagacttaaaggttgagaccgagtttgcgtctctgacatgggtaggcagaccgttccataaaaatggagctctataggagaaagccctgcctccagctgtttgcttaaaaattctagggacaattaggaggcctgcgtcttgtgaccgtagcgtacgtgtaaggtatgtacggcaggaccaaatcagagagataggtaggagcaagcccatgtaatgctttgtaggttagcagtaaaaccttgaaatcagcccttgtcttgacaggaagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1336327 True 551 lncRNA 0.52 2 38151772 38165790

Neighbor

gene id symbol gene type direction distance location
LOC110486281 LOC106601133 coding downstream 18042 38077325 ~ 38133730 (-)
LOC110486285 LOC106607319 coding downstream 99685 38043339 ~ 38052087 (-)
LOC110486284 LOC106601139 coding downstream 129458 38005936 ~ 38022314 (-)
LOC110485169 LOC106607314 coding downstream 212733 37904093 ~ 37939039 (-)
LOC110486276 LOC106601043 coding downstream 276918 37869674 ~ 37874854 (-)
LOC110486288 LOC105013206 coding upstream 126422 38292212 ~ 38303843 (-)
LOC110486290 LOC106601128 coding upstream 162067 38327857 ~ 38365149 (-)
LOC110486294 LOC106607327 coding upstream 225093 38390883 ~ 38399323 (-)
LOC110486295 LOC106607327 coding upstream 245450 38411240 ~ 38420261 (-)
LOC110486297 LOC106601124 coding upstream 324328 38490118 ~ 38551806 (-)
G1171720 LOC106607318 non-coding downstream 116897 38029095 ~ 38034875 (-)
G1171671 NA non-coding downstream 251838 37899618 ~ 37899934 (-)
G1171663 NA non-coding downstream 282184 37868589 ~ 37869588 (-)
G1171659 NA non-coding downstream 285967 37865106 ~ 37865805 (-)
G1171788 NA non-coding upstream 21395 38187185 ~ 38187485 (-)
G1171791 NA non-coding upstream 28830 38194620 ~ 38194838 (-)
G1171792 NA non-coding upstream 29340 38195130 ~ 38195366 (-)
G1171794 NA non-coding upstream 32105 38197895 ~ 38198098 (-)
G1171796 NA non-coding upstream 34802 38200592 ~ 38200804 (-)
G1171337 NA other downstream 953132 37198228 ~ 37198640 (-)
G1171149 NA other downstream 1267432 36884018 ~ 36884340 (-)
G1171057 hsp70b other downstream 1323347 36665169 ~ 36828425 (-)
G1171051 NA other downstream 1555131 36595832 ~ 36596641 (-)
G1171050 NA other downstream 1557246 36594054 ~ 36594526 (-)
LOC110486310 LOC106601114 other upstream 1014984 39136920 ~ 39183852 (-)
LOC110486313 snn other upstream 1082362 39248150 ~ 39250310 (-)
LOC110486318 kdm8 other upstream 1162426 39328216 ~ 39331966 (-)
G1173645 NA other upstream 1758132 39923922 ~ 39924959 (-)
G1174658 NA other upstream 2150328 40316118 ~ 40316859 (-)

Expression


Co-expression Network